RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 RRM2BQ7LG56 351 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 AAED1Q7RTV5 226 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 MEX3DQ86XN8 651 aaKnown RBP8.88□□□□□ -0.99
ATG4A-206ENST00000457035 WDFY1Q8IWB7 410 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 PAPD5Q8NDF8 572 aaKnown RBP8.88□□□□□ -0.99
ATG4A-206ENST00000457035 HIST1H2ACQ93077 130 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 SLCO4A1Q96BD0 722 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 APH1AQ96BI3 265 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 TXNDC15Q96J42 360 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 OCSTAMPQ9BR26 566 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 CHID1Q9BWS9 393 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 TRIM15Q9C019 465 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 NOX1Q9Y5S8 564 aa8.88□□□□□ -0.99
ATG4A-206ENST00000457035 C11orf98E9PRG8 122 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 C16orf97H3BN30 126 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 PDLIM1O00151 329 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 CDC42EP2O14613 210 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 KLF4O43474 513 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 PTP4A3O75365 173 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 ADAP00813 363 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 IGHV3-9P01782 118 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 HOXB6P17509 224 aaKnown RBP8.87□□□□□ -0.99
ATG4A-206ENST00000457035 PSMB1P20618 241 aaKnown RBP8.87□□□□□ -0.99
ATG4A-206ENST00000457035 AHCYP23526 432 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 PEX19P40855 299 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 AQP2P41181 271 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 OMPP47874 163 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 SELENOPP49908 381 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 FOXG1P55316 489 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-206ENST00000457035 CLDN17P56750 224 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 SPIBQ01892 262 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 RPL18Q07020 188 aaKnown RBP8.87□□□□□ -0.99
ATG4A-206ENST00000457035 ITGADQ13349 1161 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 C1DQ13901 141 aaKnown RBP8.87□□□□□ -0.99
ATG4A-206ENST00000457035 P2RY6Q15077 328 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 FGD3Q5JSP0 725 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 SFRP5Q5T4F7 317 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 TSPO2Q5TGU0 170 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 OR2T5Q6IEZ7 315 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 CASP12Q6UXS9 341 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 ZER1Q7Z7L7 766 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 SPATA24Q86W54 205 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 CXorf67Q86X51 503 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-206ENST00000457035 UEVLDQ8IX04 471 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 CDK20Q8IZL9 346 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 ZNF295-AS1Q8N0V1 137 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 LRRC75AQ8NAA5 344 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 OR4K5Q8NGD3 323 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 OR4C15Q8NGM1 316 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 OR2T29Q8NH02 315 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 MOSPD2Q8NHP6 518 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 LINC01560Q8TB33 94 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 ITPKCQ96DU7 683 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 WFIKKN1Q96NZ8 548 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 ALPK1Q96QP1 1244 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 TNFRSF13CQ96RJ3 184 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 GPA33Q99795 319 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 SLC7A10Q9NS82 523 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 CCM2LQ9NUG4 571 aaPredicted RBP8.87□□□□□ -0.99
ATG4A-206ENST00000457035 MED29Q9NX70 200 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 VNN3Q9NY84 501 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 MALT1Q9UDY8 824 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 AURKCQ9UQB9 309 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 HIF3AQ9Y2N7 669 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 GPR52Q9Y2T5 361 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 LYVE1Q9Y5Y7 322 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 APCP25054 2843 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 LRBAP50851 2863 aa8.87□□□□□ -0.99
ATG4A-206ENST00000457035 TACC2O95359 2948 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 SLC35F4A4IF30 521 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 TUBAL3A6NHL2 446 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 EFCAB9A8MZ26 197 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 TNFRSF11BO00300 401 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 RNF13O43567 381 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 UPK3AO75631 287 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 OR6A2O95222 327 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 F13BP05160 661 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 IFNGR1P15260 489 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 ZNF26P17031 533 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-206ENST00000457035 COX5AP20674 150 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 IGHV1-2P23083 117 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 CCKARP32238 428 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 KIR2DL3P43628 341 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 GPR4P46093 362 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 SLC9A3P48764 834 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 ERFP50548 548 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 RPS4XP62701 263 aaKnown RBP8.86□□□□□ -0.99
ATG4A-206ENST00000457035 IL1RL1Q01638 556 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 POU3F1Q03052 451 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-206ENST00000457035 LGALS3BPQ08380 585 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 FAPQ12884 760 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 PPP1R8Q12972 351 aaKnown RBP8.86□□□□□ -0.99
ATG4A-206ENST00000457035 TSC22D1Q15714 1073 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 ANKDD1AQ495B1 522 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-206ENST00000457035 ANKRD34AQ69YU3 496 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 ZNF770Q6IQ21 691 aaPredicted RBP8.86□□□□□ -0.99
ATG4A-206ENST00000457035 C1orf94Q6P1W5 598 aa8.86□□□□□ -0.99
ATG4A-206ENST00000457035 NIPAL3Q6P499 406 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms