RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TTLL10Q6ZVT0 673 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 GATSQ8NAP1 163 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 ZBTB44Q8NCP5 570 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 SLC25A38Q96DW6 304 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 TCTN2Q96GX1 697 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 OR2M2Q96R28 347 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 KCNK15Q9H427 330 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 PRTFDC1Q9NRG1 225 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 SPATA2Q9UM82 520 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 MRPS17Q9Y2R5 130 aaKnown RBP11.32□□□□□ -0.6
LINC00959-201ENST00000456581 PCNX3Q9H6A9 2034 aa11.32□□□□□ -0.6
LINC00959-201ENST00000456581 MEIS3P1A6NDR6 274 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 RHPN2P1A8MT19 583 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 B8ZZF3 427 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 PIAS2O75928 621 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 RPS4Y1P22090 263 aaKnown RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 MMP15P51511 669 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 STARD6P59095 220 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 TSPAN5P62079 268 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 TUSC1Q2TAM9 212 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 APOOLQ6UXV4 268 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 CDH24Q86UP0 819 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 CDK20Q8IZL9 346 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 SLC25A45Q8N413 288 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF511Q8NB15 262 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ADAMTS14Q8WXS8 1223 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 NR4A3Q92570 626 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 KCTD12Q96CX2 325 aaKnown RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF436Q9C0F3 470 aaPredicted RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 HRASLSQ9HDD0 168 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 KRCC1Q9NPI7 259 aaPredicted RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 H7C1C5 153 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 GALP22466 123 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 RPL4P36578 427 aaKnown RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 EFNA3P52797 238 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 HNRNPKP61978 463 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 LCN6P62502 163 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ERVK-25P63136 954 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 SIRPAP78324 504 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ALG10BQ5I7T1 473 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 OR5M10Q6IEU7 315 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ALKAL2Q6UX46 152 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 RTL4Q6ZR62 310 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 GPALPP1Q8IXQ4 340 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 C16orf52Q8NHV5 167 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 RGP1Q92546 391 aaPredicted RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 NXPE2Q96DL1 559 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 SMIM19Q96E16 107 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 LIN7BQ9HAP6 207 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 RDH8Q9NYR8 311 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 RPS6KB2Q9UBS0 482 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 PCDHGA9Q9Y5G4 932 aaKnown RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 OR6C68A6NDL8 312 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 SRPX2O60687 465 aaPredicted RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 NKX2-2O95096 273 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 GPANK1O95872 356 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 THBS1P07996 1170 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 CD1CP29017 333 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 NUDT1P36639 197 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 CCR9P51686 369 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ANGPT1Q15389 498 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 C14orf28Q4W4Y0 310 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 FAM199XQ6PEV8 388 aaPredicted RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 KIRREL2Q6UWL6 708 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 TMPRSS11FQ6ZWK6 438 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 TPRA1Q86W33 373 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 SLC35F2Q8IXU6 374 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 SLC35F3Q8IY50 421 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 UXS1Q8NBZ7 420 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 OR4C3Q8NH37 302 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 TSLPQ969D9 159 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 KLHL15Q96M94 604 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 VSTM2LQ96N03 204 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 STACQ99469 402 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 B3GNT4Q9C0J1 378 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 PDE7BQ9NP56 450 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ZNF69Q9UC07 566 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 ING1Q9UK53 422 aaPredicted RBP11.31□□□□□ -0.6
LINC00959-201ENST00000456581 PCDHGA5Q9Y5G8 931 aa11.31□□□□□ -0.6
LINC00959-201ENST00000456581 A0A0B4J2E0 115 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 A0A1B0GX12 115 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 TMEM150CB9EJG8 249 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 H0YC42 278 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 CTNSO60931 367 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 CT45A8P0DMV1 189 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 CT45A9P0DMV2 189 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 HSD17B12Q53GQ0 312 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 CT45A2Q5DJT8 189 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 TCTE1Q5JU00 501 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 BTN2A1Q7KYR7 527 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 C17orf82Q86X59 251 aaPredicted RBP11.3□□□□□ -0.6
LINC00959-201ENST00000456581 CADM4Q8NFZ8 388 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 SMIM4Q8WVI0 70 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 FOXN4Q96NZ1 517 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 TRAF4Q9BUZ4 470 aaPredicted RBP11.3□□□□□ -0.6
LINC00959-201ENST00000456581 PRDM9Q9NQV7 894 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 PIPOXQ9P0Z9 390 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 PLCL2Q9UPR0 1127 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 TLCD2A6NGC4 264 aa11.3□□□□□ -0.6
LINC00959-201ENST00000456581 LILRA5A6NI73 299 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms