RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 VRK1Q99986 396 aaPredicted RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 RXFP3Q9NSD7 469 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 COA4Q9NYJ1 87 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 SCN5AQ14524 2016 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 GOLGA4Q13439 2230 aaKnown RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 TRAV18A0A075B6X5 111 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 TMEM218A2RU14 115 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 LILRB3O75022 631 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 CD8AP01732 235 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 CXCL10P02778 98 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 CD3DP04234 171 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 NGFRP08138 427 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 CPMP14384 443 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 GPR85P60893 370 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 PPIAP62937 165 aaKnown RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 UBE2IP63279 158 aaKnown RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 SSBP1Q04837 148 aaKnown RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 SNTB1Q13884 538 aaKnown RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 ELAVL3Q14576 367 aaKnown RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 TMEM88Q6PEY1 159 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 NPEPL1Q8NDH3 523 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 ZNF417Q8TAU3 575 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 RBM18Q96H35 190 aaKnown RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 ZNF426Q9BUY5 554 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 ZNF768Q9H5H4 540 aaKnown RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 MKKSQ9NPJ1 570 aaPredicted RBP12.53□□□□□ -0.4
PTPRE-204ENST00000455661 ADAM18Q9Y3Q7 739 aa12.53□□□□□ -0.4
PTPRE-204ENST00000455661 TMEM82A0PJX8 343 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 MEIS3P1A6NDR6 274 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 GPR31O00270 319 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 PRICKLE3O43900 615 aaPredicted RBP12.52□□□□□ -0.41
PTPRE-204ENST00000455661 CTAG2O75638 210 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF432O94892 652 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 GLCEO94923 617 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 ITGB2P05107 769 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 ACTBP60709 375 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 ACTG1P63261 375 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 TAF13Q15543 124 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 HNRNPA1L2Q32P51 320 aaKnown RBP12.52□□□□□ -0.41
PTPRE-204ENST00000455661 LY6G6FQ5SQ64 297 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 YOD1Q5VVQ6 348 aaPredicted RBP12.52□□□□□ -0.41
PTPRE-204ENST00000455661 LPCAT3Q6P1A2 487 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 USP53Q70EK8 1073 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 LDLRAD3Q86YD5 345 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 PUSL1Q8N0Z8 303 aaKnown RBP12.52□□□□□ -0.41
PTPRE-204ENST00000455661 BOLLQ8N9W6 283 aaKnown RBP12.52□□□□□ -0.41
PTPRE-204ENST00000455661 SLAIN1Q8ND83 568 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 DOK4Q8TEW6 326 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
PTPRE-204ENST00000455661 PDCD10Q9BUL8 212 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 POTEKPQ9BYX7 375 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 FANCFQ9NPI8 374 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 PRDM9Q9NQV7 894 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 TNFSF18Q9UNG2 199 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 ERVK-19Q9WJR5 959 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 PLEKHM1Q9Y4G2 1056 aa12.52□□□□□ -0.41
PTPRE-204ENST00000455661 PRRC2BQ5JSZ5 2229 aaKnown RBP12.52□□□□□ -0.41
PTPRE-204ENST00000455661 ARPC4-TTLL3A0A0A6YYG9 625 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 TRBV5-5A0A0J9YX44 114 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 OR6C68A6NDL8 312 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 BRINP1O60477 761 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 OR8G3PP0DMU2 310 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 SLC25A4P12235 298 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 MEOX2P50222 304 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 PLA2G7Q13093 441 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 DHCR24Q15392 516 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF684Q5T5D7 378 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 C11orf87Q6NUJ2 197 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ZCCHC12Q6PEW1 402 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ENPP7Q6UWV6 458 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 TMED4Q7Z7H5 227 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 OR1M1Q8NGA1 313 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 DVL3Q92997 716 aaPredicted RBP12.51□□□□□ -0.41
PTPRE-204ENST00000455661 CCDC74AQ96AQ1 378 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF707Q96C28 371 aaPredicted RBP12.51□□□□□ -0.41
PTPRE-204ENST00000455661 Q96M85 177 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 SLC25A21Q9BQT8 299 aaPredicted RBP12.51□□□□□ -0.41
PTPRE-204ENST00000455661 GPR174Q9BXC1 333 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 COMMD4Q9H0A8 199 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 GAREM1Q9H706 876 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ZNF230Q9UIE0 474 aaPredicted RBP12.51□□□□□ -0.41
PTPRE-204ENST00000455661 PCDHB10Q9UN67 800 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.51□□□□□ -0.41
PTPRE-204ENST00000455661 GPR89AB7ZAQ6 455 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 SRPX2O60687 465 aaPredicted RBP12.51□□□□□ -0.41
PTPRE-204ENST00000455661 FGF19O95750 216 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 MELTFP08582 738 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 GPR89BP0CG08 455 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 GABRA3P34903 492 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 RFC3P40938 356 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 TAS2R19P59542 299 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 MICBQ29980 383 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 FHL5Q5TD97 284 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 ACOT7LQ6ZUV0 252 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 OR5M8Q8NGP6 311 aa12.51□□□□□ -0.41
PTPRE-204ENST00000455661 SLC25A28Q96A46 364 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms