RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 PIK3C3Q8NEB9 887 aa12.72□□□□□ -0.37
HSPG2-207ENST00000453796 TXNDC15Q96J42 360 aa12.72□□□□□ -0.37
HSPG2-207ENST00000453796 LRR1Q96L50 414 aa12.72□□□□□ -0.37
HSPG2-207ENST00000453796 Q96MF0 132 aa12.72□□□□□ -0.37
HSPG2-207ENST00000453796 HOPXQ9BPY8 73 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-207ENST00000453796 EMC6Q9BV81 110 aa12.72□□□□□ -0.37
HSPG2-207ENST00000453796 EFCAB1Q9HAE3 211 aa12.72□□□□□ -0.37
HSPG2-207ENST00000453796 MED29Q9NX70 200 aa12.72□□□□□ -0.37
HSPG2-207ENST00000453796 TAS2R5Q9NYW4 299 aa12.72□□□□□ -0.37
HSPG2-207ENST00000453796 CRNNQ9UBG3 495 aaPredicted RBP12.72□□□□□ -0.37
HSPG2-207ENST00000453796 SLC35F4A4IF30 521 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 OR5F1O95221 314 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 CH25HO95992 272 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 IGF2P01344 180 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 ADORA3P0DMS8 318 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 HOXB1P14653 301 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-207ENST00000453796 SLC7A2P52569 658 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 UGT2B15P54855 530 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 ARF1P84077 181 aaKnown RBP12.71□□□□□ -0.37
HSPG2-207ENST00000453796 IL1RL1Q01638 556 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 LIPEQ05469 1076 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 PIN1Q13526 163 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-207ENST00000453796 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 C11orf71Q6IPW1 123 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 SLC22A25Q6T423 547 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 KLHL24Q6TFL4 600 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 DEF8Q6ZN54 512 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 C20orf196Q8IYI0 205 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 CIARTQ8N365 385 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-207ENST00000453796 GPR137CQ8N3F9 429 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 C10orf53Q8N6V4 93 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 C18orf12Q96KH6 178 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 GSX1Q9H4S2 264 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-207ENST00000453796 CRLF2Q9HC73 371 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 NANSQ9NR45 359 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 ABCD2Q9UBJ2 740 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 RIMS3Q9UJD0 308 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 ZNF229Q9UJW7 825 aa12.71□□□□□ -0.37
HSPG2-207ENST00000453796 C2CD3Q4AC94 2353 aa12.71□□□□□ -0.38
HSPG2-207ENST00000453796 A0A096LPE4 126 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 IGHV1-18A0A0C4DH31 117 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 A0A1W2PPZ6 126 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF503-AS2A6NEH8 195 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF99A8MXY4 864 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-207ENST00000453796 C11orf98E9PRG8 122 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 KPNA4O00629 521 aaPredicted RBP12.7□□□□□ -0.38
HSPG2-207ENST00000453796 IGLV1-44P01699 117 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 MT-ND1P03886 318 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 THRBP10828 461 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 PAX7P23759 505 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 PRDX6P30041 224 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 CDKN1AP38936 164 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 RBM34P42696 430 aaKnown RBP12.7□□□□□ -0.38
HSPG2-207ENST00000453796 GSK3BP49841 420 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 NUDT2P50583 147 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 GYS2P54840 703 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 ATP5J2P56134 94 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 RIPPLY3P57055 190 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 TAS2R41P59536 307 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 C3orf36Q3SXR2 165 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 ZNF627Q7L945 461 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 PFN4Q8NHR9 129 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 TMEM255BQ8WV15 326 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 COX4I2Q96KJ9 171 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 SLC38A2Q96QD8 506 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 DHRS9Q9BPW9 319 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 ALG2Q9H553 416 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 A4GNTQ9UNA3 340 aa12.7□□□□□ -0.38
HSPG2-207ENST00000453796 CR1P17927 2039 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 GMNCA6NCL1 334 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 M0R3G1 203 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 CXCR6O00574 342 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 IGKV3-15P01624 115 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 INHBBP09529 407 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 TSPAN19P0C672 248 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 FUT4P22083 530 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 AHCYP23526 432 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 TTKP33981 857 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 UBE2NP61088 152 aaKnown RBP12.69□□□□□ -0.38
HSPG2-207ENST00000453796 TUBA1BP68363 451 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 TUBA4AP68366 448 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 CAMK2DQ13557 499 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 CARD17Q5XLA6 110 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 TUBA1AQ71U36 451 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 CBLL1Q75N03 491 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 VTCN1Q7Z7D3 282 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 TMEM239Q8WW34 195 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 LIPHQ8WWY8 451 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 CMTM5Q96DZ9 223 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 TPD52L3Q96J77 140 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 PRRC1Q96M27 445 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 SMR3AQ99954 134 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 FAM107BQ9H098 131 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 NSRP1Q9H0G5 558 aaKnown RBP12.69□□□□□ -0.38
HSPG2-207ENST00000453796 C20orf141Q9NUB4 165 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 FAIMQ9NVQ4 179 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 POU2F3Q9UKI9 436 aa12.69□□□□□ -0.38
HSPG2-207ENST00000453796 CHD3Q12873 2000 aaKnown RBP12.68□□□□□ -0.38
HSPG2-207ENST00000453796 TRIM64A6NGJ6 449 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms