RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ME2P23368 584 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 CCNE1P24864 410 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 FOXN2P32314 431 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 RPL4P36578 427 aaKnown RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 IDH2P48735 452 aaKnown RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 DNA2P51530 1060 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 FUT6P51993 359 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 XGP55808 180 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 DLX5P56178 289 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 CLDN6P56747 220 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 BTG1P62324 171 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC35B1P78383 322 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 POU3F1Q03052 451 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 MFAP5Q13361 173 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 FLOT2Q14254 428 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 EMC2Q15006 297 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC9A3R2Q15599 337 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 POU2AF1Q16633 256 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 ISXQ2M1V0 245 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 MIDNQ504T8 468 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 WASHC2DQ5SRD0 308 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 OGFRL1Q5TC84 451 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 METTL21CQ5VZV1 264 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 DUPD1Q68J44 220 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 ACOT7LQ6ZUV0 252 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 FAM57BQ71RH2 274 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 TSEN54Q7Z6J9 526 aaKnown RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 CMC1Q7Z7K0 106 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 TRAPPC5Q8IUR0 188 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 BBS7Q8IWZ6 715 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 LINC01561Q8N1V8 128 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 RIBC1Q8N443 379 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 C2orf73Q8N5S3 287 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 KIR3DL3Q8N743 410 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR2L5Q8NG80 312 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR52H1Q8NGJ2 320 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR1J1Q8NGS3 322 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR2Y1Q8NGV0 311 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR6K6Q8NGW6 343 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR52N5Q8NH56 324 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 SPPL2AQ8TCT8 520 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 MAGEC3Q8TD91 643 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 ADAMTS16Q8TE57 1224 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 CXorf40AQ8TE69 158 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 TMEM255BQ8WV15 326 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 RORBQ92753 470 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 DLX4Q92988 240 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 MYEOVQ96EZ4 313 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 C4orf45Q96LM5 186 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 Q96MF0 132 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 SERPINB12Q96P63 405 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 CPXM1Q96SM3 734 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 WDR77Q9BQA1 342 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 BARHL1Q9BZE3 327 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 TRIM4Q9C037 500 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 EML4Q9HC35 981 aaKnown RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 ISYNA1Q9NPH2 558 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 ASCL3Q9NQ33 180 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC2A9Q9NRM0 540 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 CLN6Q9NWW5 311 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 C19orf25Q9UFG5 118 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 TMCO1Q9UM00 188 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 UBQLN1Q9UMX0 589 aaKnown RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 TCF19Q9Y242 345 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 DHRS7Q9Y394 339 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 EXOSC1Q9Y3B2 195 aaKnown RBP3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 MMACHCQ9Y4U1 282 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 CSNK1G3Q9Y6M4 447 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 ABCB11O95342 1321 aa3.84□□□□□ -1.79
HMGB3P21-201ENST00000452483 TRBV7-9A0A0J9YWB2 115 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 CENPVL1A0A0U1RR11 272 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 A0A1B0GVI7 797 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 TCRBV9S1A1TA0A576 114 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 NKX6-3A6NJ46 265 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 RNF212BA8MTL3 300 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 SEC14L6B5MCN3 397 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 G3V3Y1 287 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 PLPP3O14495 311 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 TGOLN2O43493 480 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 RAMP2O60895 175 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 CEACAM4O75871 244 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 SNAPINO95295 136 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 SERPINA1P01009 418 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 TCRBP04435 133 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 BCKDHAP12694 445 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 RNH1P13489 461 aaKnown RBP3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 MYOGP15173 224 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 S100A1P23297 94 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 OPRD1P41143 372 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 EMDP50402 254 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 UGT2B15P54855 530 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 BACE1P56817 501 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 RPL27P61353 136 aaKnown RBP3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 LSM6P62312 80 aaKnown RBP3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 AESQ08117 197 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 RIPPLY1Q0D2K3 151 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 RAB40BQ12829 278 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 EIF2B1Q14232 305 aaKnown RBP3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 GPNMBQ14956 572 aa3.83□□□□□ -1.8
HMGB3P21-201ENST00000452483 SPCS2Q15005 226 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms