RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 FAM91A1Q658Y4 838 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 REP15Q6BDI9 236 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 ZNF627Q7L945 461 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 MDP1Q86V88 176 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 SNX32Q86XE0 403 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 MEX3DQ86XN8 651 aaKnown RBP9.4□□□□□ -0.9
USP1-204ENST00000452143 UEVLDQ8IX04 471 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 CDK20Q8IZL9 346 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 SCAIQ8N9R8 606 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 OR6S1Q8NH40 331 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 GTF2H4Q92759 462 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 MRPL24Q96A35 216 aaKnown RBP9.4□□□□□ -0.9
USP1-204ENST00000452143 ZNF837Q96EG3 531 aaPredicted RBP9.4□□□□□ -0.9
USP1-204ENST00000452143 SLC41A3Q96GZ6 507 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 LRR1Q96L50 414 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 SNX18Q96RF0 628 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 DENND2DQ9H6A0 471 aaPredicted RBP9.4□□□□□ -0.9
USP1-204ENST00000452143 KLHL14Q9P2G3 628 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 TESQ9UGI8 421 aaKnown RBP9.4□□□□□ -0.9
USP1-204ENST00000452143 FBXL3Q9UKT7 428 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 CMAHPQ9Y471 501 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 SPEF1Q9Y4P9 236 aa9.4□□□□□ -0.9
USP1-204ENST00000452143 IGKV1D-42A0A075B6H8 117 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 A0A0A6YYJ9 748 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 A0A1B0GWA3 101 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 B4DSR2 109 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 M0R233 179 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 CLIC1O00299 241 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 SYNGR3O43761 229 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 IGFBP1P08833 259 aaPredicted RBP9.39□□□□□ -0.91
USP1-204ENST00000452143 KITP10721 976 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 NQO1P15559 274 aaKnown RBP9.39□□□□□ -0.91
USP1-204ENST00000452143 HOXB9P17482 250 aaPredicted RBP9.39□□□□□ -0.91
USP1-204ENST00000452143 HTR2AP28223 471 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 SRP14P37108 136 aaKnown RBP9.39□□□□□ -0.91
USP1-204ENST00000452143 SLC18A1P54219 525 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 NCALDP61601 193 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 RPS23P62266 143 aaKnown RBP9.39□□□□□ -0.91
USP1-204ENST00000452143 HOXC5Q00444 222 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 IL1RL1Q01638 556 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 SCGB2A2Q13296 93 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 SLC9B1Q4ZJI4 515 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
USP1-204ENST00000452143 KRT80Q6KB66 452 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 ULK3Q6PHR2 472 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 DHRS4L2Q6PKH6 230 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 C20orf196Q8IYI0 205 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 ZCCHC24Q8N2G6 241 aaKnown RBP9.39□□□□□ -0.91
USP1-204ENST00000452143 MIER2Q8N344 545 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 GOLGA6L1Q8N7Z2 621 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 ANKRD42Q8N9B4 389 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 OR9I1Q8NGQ6 314 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 MAL2Q969L2 176 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 TAAR8Q969N4 342 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 EPYCQ99645 322 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 SPATA5L1Q9BVQ7 753 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 PAIP1Q9H074 479 aaKnown RBP9.39□□□□□ -0.91
USP1-204ENST00000452143 MS4A5Q9H3V2 200 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 B3GAT2Q9NPZ5 323 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 B3GNT2Q9NY97 397 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 NOX1Q9Y5S8 564 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 MGAM2Q2M2H8 2515 aa9.39□□□□□ -0.91
USP1-204ENST00000452143 A0A087WUJ7 227 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 TMEM120BA0PK00 339 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 SH3PXD2BA1X283 911 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 M0R3G1 203 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 UBDO15205 165 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 SEC14L2O76054 403 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 HLA-HP01893 362 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 ADRA2AP08913 450 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 ZNF14P17017 642 aaPredicted RBP9.38□□□□□ -0.91
USP1-204ENST00000452143 ITGA2P17301 1181 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 GLRXP35754 106 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 MRPL19P49406 292 aaKnown RBP9.38□□□□□ -0.91
USP1-204ENST00000452143 WDR4P57081 412 aaKnown RBP9.38□□□□□ -0.91
USP1-204ENST00000452143 MRPS11P82912 194 aaKnown RBP9.38□□□□□ -0.91
USP1-204ENST00000452143 PUDPQ08623 228 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 TRIP10Q15642 601 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 TRMT5Q32P41 509 aaKnown RBP9.38□□□□□ -0.91
USP1-204ENST00000452143 LRIF1Q5T3J3 769 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 REEP3Q6NUK4 255 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 DEF8Q6ZN54 512 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 MAVSQ7Z434 540 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 GLCCI1Q86VQ1 547 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 KRT73Q86Y46 540 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 BHLHE22Q8NFJ8 381 aaPredicted RBP9.38□□□□□ -0.91
USP1-204ENST00000452143 ZFAND2BQ8WV99 257 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 SLC47A1Q96FL8 570 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 ASPNQ9BXN1 380 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 MRPL37Q9BZE1 423 aaKnown RBP9.38□□□□□ -0.91
USP1-204ENST00000452143 TPK1Q9H3S4 243 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 EVA1AQ9H8M9 152 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 SELENONQ9NZV5 590 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 GMEB1Q9Y692 573 aa9.38□□□□□ -0.91
USP1-204ENST00000452143 A0A0B4J2E0 115 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 A0A1B0GX12 115 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 PRORSD1PA6NEY8 169 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 ENTPD5O75356 428 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 UBL3O95164 117 aa9.37□□□□□ -0.91
USP1-204ENST00000452143 RAB36O95755 333 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms