RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ZIC4Q8N9L1 334 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 RELL2Q8NC24 303 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-202ENST00000451053 OR9K2Q8NGE7 335 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 OR13C2Q8NGS9 318 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 TEX47Q8TBZ9 253 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 CYGBQ8WWM9 190 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 ASB5Q8WWX0 329 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 STARD4Q96DR4 205 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 GPA33Q99795 319 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 SF3B5Q9BWJ5 86 aaKnown RBP11.58□□□□□ -0.56
VPS33A-202ENST00000451053 SFXN3Q9BWM7 321 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 TEX12Q9BXU0 123 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 GP6Q9HCN6 339 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 TAS2R5Q9NYW4 299 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 COQ3Q9NZJ6 369 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 RASD1Q9Y272 281 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 EMC9Q9Y3B6 208 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 LRRC42Q9Y546 428 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 FLVCR1Q9Y5Y0 555 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 CDH10Q9Y6N8 788 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 HIVEP3Q5T1R4 2406 aa11.58□□□□□ -0.56
VPS33A-202ENST00000451053 TRAV27A0A087WT01 109 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 WIPF3A6NGB9 483 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF724A8MTY0 619 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 C11orf98E9PRG8 122 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 BLOC1S5-TXNDC5H3BN57 136 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 SLC16A6O15403 523 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 MITFO75030 526 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-202ENST00000451053 VAMP5O95183 116 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 IL18BPO95998 194 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 HIST1H2ABP04908 130 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 ADORA3P0DMS8 318 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 HLA-DOBP13765 273 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 EDNRAP25101 427 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 UQCRC1P31930 480 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 NTF4P34130 210 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 OPRM1P35372 400 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 AQP2P41181 271 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 CRISP1P54107 249 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 PUDPQ08623 228 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 KEAP1Q14145 624 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 POU4F3Q15319 338 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 ZIK1Q3SY52 487 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-202ENST00000451053 TMEM201Q5SNT2 666 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF620Q6ZNG0 422 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 HIST3H2AQ7L7L0 130 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF808Q8N4W9 903 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-202ENST00000451053 SETD9Q8NE22 299 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 OR52L1Q8NGH7 329 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 MOSPD2Q8NHP6 518 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 FANK1Q8TC84 345 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 TFAP2CQ92754 450 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 HIST1H2ACQ93077 130 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 OXGR1Q96P68 337 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF385AQ96PM9 386 aaKnown RBP11.57□□□□□ -0.56
VPS33A-202ENST00000451053 MBOAT4Q96T53 435 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 APOL4Q9BPW4 351 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 PRRG3Q9BZD7 231 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 C12orf49Q9H741 205 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 FAM118AQ9NWS6 357 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 EMC3Q9P0I2 261 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 REV1Q9UBZ9 1251 aa11.57□□□□□ -0.56
VPS33A-202ENST00000451053 ZNF629Q9UEG4 869 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-202ENST00000451053 RP1L1Q8IWN7 2480 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-202ENST00000451053 LOC100130705A0A1B0GUX0 176 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 FAM90A27PA6NNH2 459 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 GPR171O14626 319 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 DVL2O14641 736 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 TRAF3IP2O43734 574 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-202ENST00000451053 SERPINI2O75830 405 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 SMNDC1O75940 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
VPS33A-202ENST00000451053 OR6A2O95222 327 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 CGAP01215 116 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 TSPAN19P0C672 248 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 AHCYP23526 432 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 PRPS1P60891 318 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 RPS4XP62701 263 aaKnown RBP11.56□□□□□ -0.56
VPS33A-202ENST00000451053 ADARB1P78563 741 aaKnown RBP11.56□□□□□ -0.56
VPS33A-202ENST00000451053 POU3F1Q03052 451 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-202ENST00000451053 RPL18Q07020 188 aaKnown RBP11.56□□□□□ -0.56
VPS33A-202ENST00000451053 ZP4Q12836 540 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 SLC36A3Q495N2 470 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 ZBED5Q49AG3 693 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 C6orf52Q5T4I8 152 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 EEF1A1P5Q5VTE0 462 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 XKRXQ6PP77 449 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 SMARCD3Q6STE5 483 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 NHLRC1Q6VVB1 395 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 CREB3L2Q70SY1 520 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.56□□□□□ -0.56
VPS33A-202ENST00000451053 UEVLDQ8IX04 471 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 OR6K3Q8NGY3 331 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 OR51A7Q8NH64 312 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 LILRB4Q8NHJ6 448 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 SSC4DQ8WTU2 575 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 HRASLS5Q96KN8 279 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 TNFRSF13CQ96RJ3 184 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 PITX2Q99697 317 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 GRIP2Q9C0E4 1043 aa11.56□□□□□ -0.56
VPS33A-202ENST00000451053 OPN3Q9H1Y3 402 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms