RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ZFYVE1Q9HBF4 777 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 KRCC1Q9NPI7 259 aaPredicted RBP7.9□□□□□ -1.14
LSM5-208ENST00000450169 TAAR2Q9P1P5 351 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 P2RX2Q9UBL9 471 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 MTFP1Q9UDX5 166 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 ICKQ9UPZ9 632 aa7.9□□□□□ -1.14
LSM5-208ENST00000450169 GXYLT2A0PJZ3 443 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 C7orf77A4D0Y5 90 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 CASTOR2A6NHX0 329 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 MEIS3P2A8K0S8 358 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 F5H5T6 163 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 NPC1O15118 1278 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 SLC16A5O15375 505 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 PMP2P02689 132 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 CD5P06127 495 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 SNRNP70P08621 437 aaKnown RBP7.9□□□□□ -1.15
LSM5-208ENST00000450169 SRMP19623 302 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 TACR2P21452 398 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 BUD31P41223 144 aaPredicted RBP7.9□□□□□ -1.15
LSM5-208ENST00000450169 NAAAQ02083 359 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 ZNF85Q03923 595 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 TDGQ13569 410 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 COL13A1Q5TAT6 717 aaPredicted RBP7.9□□□□□ -1.15
LSM5-208ENST00000450169 ZNF697Q5TEC3 545 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 CARFQ8N187 725 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 KLHDC9Q8NEP7 349 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 OR56B1Q8NGI3 324 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 OR10D4PQ8NGN7 298 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 NEIL2Q969S2 332 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 SMIM19Q96E16 107 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 SEC22AQ96IW7 307 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 AKR1E2Q96JD6 320 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 MICU1Q9BPX6 476 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 HCAR1Q9BXC0 346 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 NRSN2Q9GZP1 204 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 SLC25A18Q9H1K4 315 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 POT1Q9NUX5 634 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 MARCH2Q9P0N8 246 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 OR5V1Q9UGF6 321 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 SCML2Q9UQR0 700 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 KPTNQ9Y664 436 aa7.9□□□□□ -1.15
LSM5-208ENST00000450169 PRAMEF27A3QJZ7 478 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 SLC22A31A6NKX4 558 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 MARCH11A6NNE9 402 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CCSO14618 274 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CTNSO60931 367 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 MOSPD3O75425 235 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 ZNF821O75541 412 aaPredicted RBP7.89□□□□□ -1.15
LSM5-208ENST00000450169 GLSO94925 669 aaPredicted RBP7.89□□□□□ -1.15
LSM5-208ENST00000450169 ITGB2P05107 769 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 KLK1P06870 262 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 ITGA5P08648 1049 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CLTBP09497 229 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 AKAIN1P0CW23 69 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 MPC1LP0DKB6 136 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 NR2F1P10589 423 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 ADRB3P13945 408 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 GTF2F2P13984 249 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 NME2P22392 152 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 PPP2R1BP30154 601 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CD80P33681 288 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 PRKXP51817 358 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 PNLIPRP1P54315 467 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CD81P60033 236 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 RPS11P62280 158 aaKnown RBP eCLIP7.89□□□□□ -1.15
LSM5-208ENST00000450169 HMGN3Q15651 99 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 STPG1Q5TH74 334 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 MED27Q6P2C8 311 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 OLIG3Q7RTU3 272 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 TAS1R1Q7RTX1 841 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 TMED4Q7Z7H5 227 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 OR4E2Q8NGC2 313 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 MIB2Q96AX9 1013 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 TCTN2Q96GX1 697 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 SAMD8Q96LT4 415 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CAMK1GQ96NX5 476 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 IP6K3Q96PC2 410 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 SELENOIQ9C0D9 397 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 FN3KRPQ9HA64 309 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 LHX9Q9NQ69 397 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 UPB1Q9UBR1 384 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 GDF2Q9UK05 429 aaPredicted RBP7.89□□□□□ -1.15
LSM5-208ENST00000450169 CEP350Q5VT06 3117 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CPSF4LA6NMK7 179 aaKnown RBP7.89□□□□□ -1.15
LSM5-208ENST00000450169 FAM157AC9JC47 383 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 C9JQL5 133 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 H7BY64 318 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 B4GALT2O60909 372 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 MED6O75586 246 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 SBK2P0C263 348 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 PGAM2P15259 253 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 PAX1P15863 534 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 G0S2P27469 103 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CD34P28906 385 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 CEACAM6P40199 344 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 RBM34P42696 430 aaKnown RBP7.89□□□□□ -1.15
LSM5-208ENST00000450169 EPHB3P54753 998 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 MANFP55145 182 aaKnown RBP7.89□□□□□ -1.15
LSM5-208ENST00000450169 NHLH2Q02577 135 aa7.89□□□□□ -1.15
LSM5-208ENST00000450169 HSPB3Q12988 150 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms