RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 ANXA8L1Q5VT79 327 aa12.6□□□□□ -0.39
UBE2F-216ENST00000445676 ATG16L1Q676U5 607 aa12.6□□□□□ -0.39
UBE2F-216ENST00000445676 PEX5LQ8IYB4 626 aa12.6□□□□□ -0.39
UBE2F-216ENST00000445676 PIK3C3Q8NEB9 887 aa12.6□□□□□ -0.39
UBE2F-216ENST00000445676 C7orf69Q9H7B7 122 aa12.6□□□□□ -0.39
UBE2F-216ENST00000445676 ZNF346Q9UL40 294 aaKnown RBP12.6□□□□□ -0.39
UBE2F-216ENST00000445676 WIPI2Q9Y4P8 454 aa12.6□□□□□ -0.39
UBE2F-216ENST00000445676 DSPPQ9NZW4 1301 aa12.6□□□□□ -0.39
UBE2F-216ENST00000445676 DOCK11Q5JSL3 2073 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 NUDT17P0C025 328 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 NR2F1P10589 423 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 FPR2P25090 351 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 GTF2E2P29084 291 aaKnown RBP12.59□□□□□ -0.39
UBE2F-216ENST00000445676 PTDSS1P48651 473 aaKnown RBP12.59□□□□□ -0.39
UBE2F-216ENST00000445676 COPZ1P61923 177 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 CCL8P80075 99 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 GALK2Q01415 458 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 NKPD1Q17RQ9 610 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 LIN52Q52LA3 116 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 ZNF813Q6ZN06 617 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 DOK3Q7L591 496 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 ZNF627Q7L945 461 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 WDFY1Q8IWB7 410 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 EPS8L3Q8TE67 593 aaKnown RBP12.59□□□□□ -0.39
UBE2F-216ENST00000445676 TAF15Q92804 592 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBE2F-216ENST00000445676 TESCQ96BS2 214 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 KTI12Q96EK9 354 aaPredicted RBP12.59□□□□□ -0.39
UBE2F-216ENST00000445676 TSPAN32Q96QS1 320 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 MKS1Q9NXB0 559 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 TAAR3PQ9P1P4 343 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 SLC17A7Q9P2U7 560 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
UBE2F-216ENST00000445676 C17orf100A8MU93 164 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 M0R082 166 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 CLPTM1O96005 669 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 B4GALT1P15291 398 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 GATA3P23771 443 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 GIPRP48546 466 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 AQP5P55064 265 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 IL13RA1P78552 427 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 C1DQ13901 141 aaKnown RBP12.58□□□□□ -0.4
UBE2F-216ENST00000445676 RAB39AQ14964 217 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 MFSD13AQ14CX5 517 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 SMU1Q2TAY7 513 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 CARD17Q5XLA6 110 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 ZNF584Q8IVC4 421 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 C20orf196Q8IYI0 205 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 VPS37AQ8NEZ2 397 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 OR52P1PQ8NH57 321 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 ZNF417Q8TAU3 575 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 PNPT1Q8TCS8 783 aaKnown RBP12.58□□□□□ -0.4
UBE2F-216ENST00000445676 MGARPQ8TDB4 240 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 APOPT1Q96IL0 206 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 PPP1R36Q96LQ0 422 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 CCDC115Q96NT0 180 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 ZNF587Q96SQ5 575 aaPredicted RBP12.58□□□□□ -0.4
UBE2F-216ENST00000445676 HINT3Q9NQE9 182 aaKnown RBP12.58□□□□□ -0.4
UBE2F-216ENST00000445676 SLC7A8Q9UHI5 535 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 PRDM4Q9UKN5 801 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 ZNF443Q9Y2A4 671 aaPredicted RBP12.58□□□□□ -0.4
UBE2F-216ENST00000445676 CACNG2Q9Y698 323 aa12.58□□□□□ -0.4
UBE2F-216ENST00000445676 IGHV1-69-2A0A0G2JMI3 117 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 AIM2O14862 343 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 AKAP8O43823 692 aaKnown RBP12.57□□□□□ -0.4
UBE2F-216ENST00000445676 RAB36O95755 333 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 NCF2P19878 526 aaPredicted RBP12.57□□□□□ -0.4
UBE2F-216ENST00000445676 CDKN2CP42773 168 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 CRYBB2P43320 205 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 RAB1AP62820 205 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 LCN2P80188 198 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 RNF220Q5VTB9 566 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 RGS7BPQ6MZT1 257 aaPredicted RBP12.57□□□□□ -0.4
UBE2F-216ENST00000445676 RBMS3Q6XE24 437 aaKnown RBP12.57□□□□□ -0.4
UBE2F-216ENST00000445676 ZNF771Q7L3S4 317 aaPredicted RBP12.57□□□□□ -0.4
UBE2F-216ENST00000445676 GTF3AQ92664 365 aaKnown RBP12.57□□□□□ -0.4
UBE2F-216ENST00000445676 ZNF48Q96MX3 618 aaPredicted RBP12.57□□□□□ -0.4
UBE2F-216ENST00000445676 EMC6Q9BV81 110 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 AKTIPQ9H8T0 292 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 ZMAT3Q9HA38 289 aaKnown RBP12.57□□□□□ -0.4
UBE2F-216ENST00000445676 MED29Q9NX70 200 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 ARMCX1Q9P291 453 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 ZNF69Q9UC07 566 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 BTNL2Q9UIR0 455 aa12.57□□□□□ -0.4
UBE2F-216ENST00000445676 IGLV3-9A0A075B6K5 115 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 CCDC154A6NI56 674 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 POM121CA8CG34 1229 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 CLDN25C9JDP6 229 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 E9PBE3 544 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 HPRP00739 348 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 PATE4P0C8F1 98 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 HLA-DOBP13765 273 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 GRPRP30550 384 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 SERPINB5P36952 375 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 RAD52P43351 418 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 ANXA11P50995 505 aaKnown RBP12.56□□□□□ -0.4
UBE2F-216ENST00000445676 TXNL4AP83876 142 aaKnown RBP12.56□□□□□ -0.4
UBE2F-216ENST00000445676 HOXC5Q00444 222 aa12.56□□□□□ -0.4
UBE2F-216ENST00000445676 OCLNQ16625 522 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms