RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 TCRBV21S2A2A0A5A6 115 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 PBX2P40425 430 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 RAB11BQ15907 218 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 DPY19L2P2Q6ZN68 376 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SPERTQ8NA61 448 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 OR5M1Q8NGP8 315 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SLC2A12Q8TD20 617 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 THAP3Q8WTV1 239 aaPredicted RBP10.87□□□□□ -0.67
MSH6-204ENST00000445503 TGM7Q96PF1 710 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 STACQ99469 402 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 SLX1AQ9BQ83 275 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 ZFP64Q9NPA5 681 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 GDE1Q9NZC3 331 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 DHDHQ9UQ10 334 aa10.87□□□□□ -0.67
MSH6-204ENST00000445503 DOCK9Q9BZ29 2069 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 CABIN1Q9Y6J0 2220 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 TMEM150CB9EJG8 249 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 M0QYG6 137 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 AIPO00170 330 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 PRAMEF2O60811 474 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 GALP22466 123 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 FXYD6P3P58550 94 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 PUDPQ08623 228 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 CAMK2DQ13557 499 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 ALKBH1Q13686 389 aaKnown RBP10.86□□□□□ -0.67
MSH6-204ENST00000445503 CD163Q86VB7 1156 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 ARMC10Q8N2F6 343 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 C15orf40Q8WUR7 153 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 SOSTQ9BQB4 213 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 UPB1Q9UBR1 384 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 SLC6A5Q9Y345 797 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 TRAV1-2A0A0B4J238 106 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 KANTRA0A1W2PQU2 76 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 RAB3DO95716 219 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 ST6GAL1P15907 406 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 CD53P19397 219 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 P2RX1P51575 399 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 C19orf57Q0VDD7 668 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 DYRK1AQ13627 763 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 MAMSTRQ6ZN01 415 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 RELL2Q8NC24 303 aaPredicted RBP10.86□□□□□ -0.67
MSH6-204ENST00000445503 ZNF485Q8NCK3 441 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 KLHL15Q96M94 604 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 KCNK15Q9H427 330 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 ELL3Q9HB65 397 aaPredicted RBP10.86□□□□□ -0.67
MSH6-204ENST00000445503 SDHAF2Q9NX18 166 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 ZNF223Q9UK11 482 aaPredicted RBP10.86□□□□□ -0.67
MSH6-204ENST00000445503 CYP8B1Q9UNU6 501 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 TP53BP1Q12888 1972 aaPredicted RBP10.86□□□□□ -0.67
MSH6-204ENST00000445503 C17orf105B2RV13 164 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 PYCARD-AS1I3L0S3 204 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 SLC16A7O60669 478 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 GALR3O60755 368 aaPredicted RBP10.86□□□□□ -0.67
MSH6-204ENST00000445503 SC5DO75845 299 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 CYB5AP00167 134 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 RAB40ALP0C0E4 278 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 SLC35E2P0CK97 266 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 SPOCK1Q08629 439 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 TMEM196Q5HYL7 178 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 STAC2Q6ZMT1 411 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 CFAP77Q6ZQR2 320 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 TRILQ7L0X0 811 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 CA13Q8N1Q1 262 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 OR51Q1Q8NH59 317 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 SLC37A2Q8TED4 501 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 CCDC107Q8WV48 283 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 RAB40AQ8WXH6 277 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 FAM46BQ96A09 425 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 PGLYRP3Q96LB9 341 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 INTS14Q96SY0 518 aa10.86□□□□□ -0.67
MSH6-204ENST00000445503 TCEAL2Q9H3H9 227 aaPredicted RBP10.86□□□□□ -0.67
MSH6-204ENST00000445503 C7orf66A4D0T2 115 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 OR2AT4A6NND4 320 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 GLCEO94923 617 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 IL9P15248 144 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 THBS2P35442 1172 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 CDNFQ49AH0 187 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 DGAT2L6Q6ZPD8 337 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 TTLL10Q6ZVT0 673 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 MED25Q71SY5 747 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 SYS1Q8N2H4 156 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 KDM8Q8N371 416 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 ZBTB44Q8NCP5 570 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 KISS1RQ969F8 398 aaPredicted RBP10.85□□□□□ -0.67
MSH6-204ENST00000445503 UBL7Q96S82 380 aaPredicted RBP10.85□□□□□ -0.67
MSH6-204ENST00000445503 PRICKLE3O43900 615 aaPredicted RBP10.85□□□□□ -0.67
MSH6-204ENST00000445503 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
MSH6-204ENST00000445503 RAB38P57729 211 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 TOMM20Q15388 145 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 GALNTL5Q7Z4T8 443 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 PM20D2Q8IYS1 436 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 OR5V1Q9UGF6 321 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 ST6GALNAC2Q9UJ37 374 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 ELF5Q9UKW6 265 aaPredicted RBP10.85□□□□□ -0.67
MSH6-204ENST00000445503 EEF1E1-BLOC1S5C9J1V9 151 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 SEC14L5O43304 696 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 CD14P08571 375 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 UBL4AP11441 157 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 TACR3P29371 465 aa10.85□□□□□ -0.67
MSH6-204ENST00000445503 NUDT1P36639 197 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms