RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ST3GAL3Q11203 375 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 HIKESHIQ53FT3 197 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 SHEQ5VZ18 495 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 VTCN1Q7Z7D3 282 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 C20orf196Q8IYI0 205 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 LRRC17Q8N6Y2 441 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 KBTBD8Q8NFY9 601 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 TMEM239Q8WW34 195 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 GEMIN6Q8WXD5 167 aaKnown RBP16.31■□□□□ 0.2
CCDC188-202ENST00000444532 TXNDC15Q96J42 360 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 CXorf56Q9H5V9 222 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 GPR35Q9HC97 309 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 TAS2R5Q9NYW4 299 aa16.31■□□□□ 0.2
CCDC188-202ENST00000444532 MED13LQ71F56 2210 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 HTR3EA5X5Y0 456 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 C11orf98E9PRG8 122 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 M0R1B8 84 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 PAX1P15863 534 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 SLC25A3Q00325 362 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 TBRG1Q3YBR2 411 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 DEPDC4Q8N2C3 294 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 SMAP2Q8WU79 429 aaPredicted RBP16.3■□□□□ 0.2
CCDC188-202ENST00000444532 TMEM255BQ8WV15 326 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 NEUROG1Q92886 237 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 PRRC1Q96M27 445 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 ADAD1Q96M93 576 aaKnown RBP16.3■□□□□ 0.2
CCDC188-202ENST00000444532 EMC6Q9BV81 110 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 TMUB1Q9BVT8 246 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 C1QTNF6Q9BXI9 259 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 GSX2Q9BZM3 304 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 CRLF2Q9HC73 371 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 MOV10Q9HCE1 1003 aaKnown RBP16.3■□□□□ 0.2
CCDC188-202ENST00000444532 B3GAT2Q9NPZ5 323 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 MED29Q9NX70 200 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 CISD1Q9NZ45 108 aaKnown RBP16.3■□□□□ 0.2
CCDC188-202ENST00000444532 ADA2Q9NZK5 511 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 TAGLN3Q9UI15 199 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 A4GNTQ9UNA3 340 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 MED31Q9Y3C7 131 aa16.3■□□□□ 0.2
CCDC188-202ENST00000444532 CADP27708 2225 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 ARPC4-TTLL3A0A0A6YYG9 625 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 RNF13O43567 381 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 SERPINA1P01009 418 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 DANCRP0C864 163 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 UMPSP11172 480 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 CD99P14209 185 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 UGT2B15P54855 530 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 UBE2NP61088 152 aaKnown RBP16.29■□□□□ 0.2
CCDC188-202ENST00000444532 ARF1P84077 181 aaKnown RBP16.29■□□□□ 0.2
CCDC188-202ENST00000444532 CEACAM16Q2WEN9 425 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 IFI44LQ53G44 452 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 FKBP9P1Q75LS8 142 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 SLC46A3Q7Z3Q1 461 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
CCDC188-202ENST00000444532 LIPHQ8WWY8 451 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 FAM162AQ96A26 154 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 SGTBQ96EQ0 304 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 CCT8L2Q96SF2 557 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 ZNF701Q9NV72 531 aaPredicted RBP16.29■□□□□ 0.2
CCDC188-202ENST00000444532 FAIMQ9NVQ4 179 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 RPS6KA6Q9UK32 745 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 ADAM21Q9UKJ8 722 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 LAMP3Q9UQV4 416 aa16.29■□□□□ 0.2
CCDC188-202ENST00000444532 HEATR1Q9H583 2144 aaKnown RBP16.28■□□□□ 0.2
CCDC188-202ENST00000444532 ZNF99A8MXY4 864 aaPredicted RBP16.28■□□□□ 0.2
CCDC188-202ENST00000444532 BLOC1S5-TXNDC5H3BN57 136 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 M0R3G1 203 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 GMNNO75496 209 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 OR7A10O76100 309 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 IFNGR1P15260 489 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 NCK1P16333 377 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 FUT1P19526 365 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 CDH11P55287 796 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 RPS4XP62701 263 aaKnown RBP16.28■□□□□ 0.2
CCDC188-202ENST00000444532 CAMK2DQ13557 499 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 PHYHD1Q5SRE7 291 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 CARD17Q5XLA6 110 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 GLYATQ6IB77 296 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 SLC22A25Q6T423 547 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 PRSS57Q6UWY2 283 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 SLC35D2Q76EJ3 337 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 NANOGNBQ7Z5D8 188 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 CCDC36Q8IYA8 594 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 OFCC1Q8IZS5 231 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 OR6X1Q8NH79 312 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 PFN4Q8NHR9 129 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 FNDC11Q9BVV2 318 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 NELFAQ9H3P2 528 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 ARL8BQ9NVJ2 186 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 SNX13Q9Y5W8 968 aa16.28■□□□□ 0.2
CCDC188-202ENST00000444532 A0A096LPE4 126 aa16.27■□□□□ 0.2
CCDC188-202ENST00000444532 A0A1W2PPZ6 126 aa16.27■□□□□ 0.2
CCDC188-202ENST00000444532 SERPINI2O75830 405 aa16.27■□□□□ 0.2
CCDC188-202ENST00000444532 SOD3P08294 240 aa16.27■□□□□ 0.2
CCDC188-202ENST00000444532 PTH2RP49190 550 aa16.27■□□□□ 0.2
CCDC188-202ENST00000444532 BIDP55957 195 aa16.27■□□□□ 0.2
CCDC188-202ENST00000444532 FOXD4Q12950 439 aaPredicted RBP16.27■□□□□ 0.2
CCDC188-202ENST00000444532 TRAM2Q15035 370 aa16.27■□□□□ 0.2
CCDC188-202ENST00000444532 PGGHGQ32M88 737 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms