RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 KDM8Q8N371 416 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 TMEM178AQ8NBL3 297 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 OR9Q1Q8NGQ5 310 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 MIB2Q96AX9 1013 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 LGALS12Q96DT0 336 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 TTTY12Q9BZ98 90 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 OR2B2Q9GZK3 357 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 ACOT13Q9NPJ3 140 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 TAS2R16Q9NYV7 291 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 TRAPPC4Q9Y296 219 aa8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 MRPS18CQ9Y3D5 142 aaKnown RBP8.54□□□□□ -1.04
SMPD4P1-203ENST00000443839 TRIM64BA6NI03 449 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 FAM166BA8MTA8 275 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 IMPA2O14732 288 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 RAB36O95755 333 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TXNDC12O95881 172 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 CLUP10909 449 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 MYL12AP19105 171 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 MEOX1P50221 254 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TNFSF10P50591 281 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 B3GALT5-AS1P59052 145 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 RAC1P63000 192 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 SLC35A1P78382 337 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 POU3F1Q03052 451 aaPredicted RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 DBPQ10586 325 aaPredicted RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TBCEQ15813 527 aaPredicted RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 ACKR1Q16570 336 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TMPPEQ6ZT21 453 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 SHFQ7M4L6 423 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 ZNF454Q8N9F8 522 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 NPEPL1Q8NDH3 523 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 OR52I1Q8NGK6 324 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 C9orf43Q8TAL5 461 aaPredicted RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 FAR1Q8WVX9 515 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TUBA1CQ9BQE3 449 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 CDCA4Q9BXL8 241 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 WARS2Q9UGM6 360 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 ZNF346Q9UL40 294 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 NCOR2Q9Y618 2525 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 DNAJC13O75165 2243 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 ZNF407Q9C0G0 2248 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 CACNA1GO43497 2377 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 hCG_2014768A0A024R1R8 64 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 OR6C68A6NDL8 312 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 ZNF99A8MXY4 864 aaPredicted RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 NPIPA5E9PKD4 350 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 H3BMQ9 156 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 SEC14L5O43304 696 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 ARHGEF9O43307 516 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 INMTO95050 263 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 PMS2P2O95744 297 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 JUNBP17275 347 aaPredicted RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 POU3F2P20265 443 aaPredicted RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 PSMB9P28065 219 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 CDKN2AP42771 156 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 DAP3P51398 398 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 RPL27P61353 136 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 LGALS3BPQ08380 585 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 MESTQ5EB52 335 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TMEM225Q6GV28 225 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 B3GLCTQ6Y288 498 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 GPAT4Q86UL3 456 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 ARIH2OSQ8N7S6 290 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TMEM99Q8N816 258 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 OR51G2Q8NGK0 314 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 FCGR1BQ92637 280 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 MUL1Q969V5 352 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 KLHL15Q96M94 604 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 COG8Q96MW5 612 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TEAD3Q99594 435 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 TXNIPQ9H3M7 391 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 RPRD1BQ9NQG5 326 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 MRPS18AQ9NVS2 196 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 CHCHD3Q9NX63 227 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 NPIPA1Q9UND3 350 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 DIMT1Q9UNQ2 313 aaKnown RBP8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 ERGIC3Q9Y282 383 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 CSAG2Q9Y5P2 127 aa8.53□□□□□ -1.04
SMPD4P1-203ENST00000443839 CHD8Q9HCK8 2581 aa8.52□□□□□ -1.04
SMPD4P1-203ENST00000443839 MS4A18H0YCH9 400 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 H7C1C5 153 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 ACOT7O00154 380 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 TNFSF11O14788 317 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 MYL12BO14950 172 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 CEACAM4O75871 244 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 ATE1O95260 518 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 RENP00797 406 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 PTHP01270 115 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 HPNP05981 417 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 LCKP06239 509 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 HLA-DOBP13765 273 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 IFNGR1P15260 489 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 ACVR1BP36896 505 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 MAGEA5P43359 124 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 LCN6P62502 163 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 PPIAP62937 165 aaKnown RBP8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 CSNK2A1P68400 391 aaPredicted RBP8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 HSF1Q00613 529 aa8.52□□□□□ -1.05
SMPD4P1-203ENST00000443839 ZP4Q12836 540 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms