RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 SH3PXD2BA1X283 911 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 SLC35F4A4IF30 521 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 ZNF503-AS2A6NEH8 195 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 RAD51DO75771 328 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 SERPINI2O75830 405 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 F13BP05160 661 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 FABP3P05413 133 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 ADORA3P0DMS8 318 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 IFNGR1P15260 489 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 NQO1P15559 274 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 ZNF43P17038 809 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 GTF2E2P29084 291 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 DNAJA1P31689 397 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 ERFP50548 548 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 CBX1P83916 185 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 TRAP1Q12931 704 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 PPP1R8Q12972 351 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 LAPTM4AQ15012 233 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 P2RY6Q15077 328 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 MTX3Q5HYI7 312 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 NANOGNBQ7Z5D8 188 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 PXKQ7Z7A4 578 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 ZER1Q7Z7L7 766 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 STK32CQ86UX6 486 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 DHFR2Q86XF0 187 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 UEVLDQ8IX04 471 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 C20orf196Q8IYI0 205 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 OR4K5Q8NGD3 323 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 OR52J3Q8NH60 311 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 FAM46AQ96IP4 442 aaKnown RBP11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 LINC00470Q9BZP3 86 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 LRMDAQ9H2I8 198 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 LIME1Q9H400 295 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 RASSF1Q9NS23 344 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 NOX1Q9Y5S8 564 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 SPG11Q96JI7 2443 aa11.28□□□□□ -0.6
PDLIM2-212ENST00000443561 TEX15Q9BXT5 2789 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 IGKV1D-43A0A0B4J1Z2 117 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 A0A1W2PR80 420 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 TCRBV3S1A0A5B6 114 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 RPL36A-HNRNPH2H7BZ11 118 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 PLAUP00749 431 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 UMPSP11172 480 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 SSTR2P30874 369 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 RRM2P31350 389 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 BIDP55957 195 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 SPIBQ01892 262 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 CAMK2DQ13557 499 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 FGD3Q5JSP0 725 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 ARMC4Q5T2S8 1044 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 CARD17Q5XLA6 110 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 ZNF770Q6IQ21 691 aaPredicted RBP11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 ZNF730Q6ZMV8 503 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 TMPRSS11FQ6ZWK6 438 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 SLC35D2Q76EJ3 337 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 TMEM179BQ7Z7N9 219 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 IGFN1Q86VF2 1251 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 ASB10Q8WXI3 467 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 KISS1RQ969F8 398 aaPredicted RBP11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 TMEM54Q969K7 222 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 LRRC46Q96FV0 321 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 BOD1Q96IK1 185 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 LURAP1Q96LR2 239 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 MUS81Q96NY9 551 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 TNFRSF13CQ96RJ3 184 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 MED18Q9BUE0 208 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 MAGIXQ9H6Y5 334 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 ASB6Q9NWX5 421 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 TAS2R16Q9NYV7 291 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 SIGLEC7Q9Y286 467 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 SLC25A15Q9Y619 301 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
PDLIM2-212ENST00000443561 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 OR5H1A6NKK0 313 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 MCIDASD6RGH6 385 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 BLOC1S5-TXNDC5H3BN57 136 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 IMPA2O14732 288 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 CLOCKO15516 846 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 PTP4A3O75365 173 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 GMNNO75496 209 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 SEC14L2O76054 403 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 IGHMP01871 453 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 PGA4P0DJD7 388 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 PGA3P0DJD8 388 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 AHCYP23526 432 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 MPGP29372 298 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 PEX19P40855 299 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 HMGA2P52926 109 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 ROR2Q01974 943 aaKnown RBP11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 HIKESHIQ53FT3 197 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 WFDC8Q8IUA0 241 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 RNF113BQ8IZP6 322 aaKnown RBP11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 UBE2J2Q8N2K1 259 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 CLDN22Q8N7P3 220 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 POMGNT2Q8NAT1 580 aa11.26□□□□□ -0.61
PDLIM2-212ENST00000443561 STEAP2Q8NFT2 490 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms