RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 CASKO14936 926 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 GDF9O60383 454 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 GPX5O75715 221 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ARL6IP5O75915 188 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 GYPBP06028 91 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 GAAP10253 952 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 EDNRAP25101 427 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 FGF9P31371 208 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 PYCR1P32322 319 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ENTPD1P49961 510 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 FHL1Q13642 323 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 GXYLT1Q4G148 440 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 CCDC58Q4VC31 144 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ACER2Q5QJU3 275 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 RAET1LQ5VY80 246 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 TIGD3Q6B0B8 471 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 RPL22L1Q6P5R6 122 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 KCTD18Q6PI47 426 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 VASH1Q7L8A9 365 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 CLEC1AQ8NC01 280 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 KCNE4Q8WWG9 221 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 KISS1RQ969F8 398 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 THOC3Q96J01 351 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 UTP23Q9BRU9 249 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 TTYH2Q9BSA4 534 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 PTDSS2Q9BVG9 487 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 OR11A1Q9GZK7 315 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 SRA1Q9HD15 236 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 LAMP5Q9UJQ1 280 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 RASD1Q9Y272 281 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 TRAPPC4Q9Y296 219 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 B3GNT3Q9Y2A9 372 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 RPH3AQ9Y2J0 694 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 CHCHD2Q9Y6H1 151 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 PRSS37A4D1T9 235 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 OR6C68A6NDL8 312 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 LIPT2A6NK58 231 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ZNF726A6NNF4 738 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 SULT2B1O00204 365 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 CDRT1O95170 752 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 VAMP5O95183 116 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 CD1AP06126 327 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 FTH1P19P0C7X4 201 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 LIFP15018 202 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ITGA3P26006 1051 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 SRD5A2P31213 254 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 PTGDSP41222 190 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 GUCA1AP43080 201 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 RPS18P62269 152 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 RPS25P62851 125 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 ZNF45Q02386 682 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 TOMM20Q15388 145 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ZNF362Q5T0B9 420 aaPredicted RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 EEF1A1P5Q5VTE0 462 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ARSKQ6UWY0 536 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 SLC35D2Q76EJ3 337 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 FAM122BQ7Z309 247 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 PXKQ7Z7A4 578 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 OR6N2Q8NGY6 317 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 C4orf36Q96KX1 117 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 OR5B2Q96R09 309 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 CENPOQ9BU64 300 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 HCAR1Q9BXC0 346 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 SPRY4Q9C004 299 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 SLITRK2Q9H156 845 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 WDR76Q9H967 626 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 SNTG1Q9NSN8 517 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 TXNL4BQ9NX01 149 aaKnown RBP5.44□□□□□ -1.54
VPS50-205ENST00000441602 GNG8Q9UK08 70 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 IKZF2Q9UKS7 526 aa5.44□□□□□ -1.54
VPS50-205ENST00000441602 ARPC4-TTLL3A0A0A6YYG9 625 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 A0A1W2PNV4 684 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 ZC3H12DA2A288 527 aaKnown RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 H3BML4 177 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 PDCD5O14737 125 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 DNPH1O43598 174 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 ZNF354AO60765 605 aaPredicted RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 GATBO75879 557 aaKnown RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 DKK1O94907 266 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 CDKN2AP42771 156 aaKnown RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 CRYBB2P43320 205 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 GABREP78334 506 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 HSF1Q00613 529 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 CDONQ4KMG0 1287 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 C22orf42Q6IC83 251 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 SLC18B1Q6NT16 456 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 H3F3CQ6NXT2 135 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 GHDCQ8N2G8 530 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 FRMD6Q96NE9 622 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 OXGR1Q96P68 337 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TMED9Q9BVK6 235 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 COMMD4Q9H0A8 199 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 SMURF1Q9HCE7 757 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 TAS2R5Q9NYW4 299 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 VSX1Q9NZR4 365 aaPredicted RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 FOXJ2Q9P0K8 574 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 A0A1W2PQL4 384 aaPredicted RBP5.43□□□□□ -1.54
VPS50-205ENST00000441602 ZNF879B4DU55 563 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 FTCDNL1E5RQL4 147 aa5.43□□□□□ -1.54
VPS50-205ENST00000441602 J3QRE1 110 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms