RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 Q96M85 177 aa13.2□□□□□ -0.3
PLOD3-205ENST00000440925 RBM4BQ9BQ04 359 aaKnown RBP13.2□□□□□ -0.3
PLOD3-205ENST00000440925 RBM4Q9BWF3 364 aaKnown RBP13.2□□□□□ -0.3
PLOD3-205ENST00000440925 MRPL13Q9BYD1 178 aaKnown RBP13.2□□□□□ -0.3
PLOD3-205ENST00000440925 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
PLOD3-205ENST00000440925 INIPQ9NRY2 104 aa13.2□□□□□ -0.3
PLOD3-205ENST00000440925 IER3IP1Q9Y5U9 82 aa13.2□□□□□ -0.3
PLOD3-205ENST00000440925 CDH10Q9Y6N8 788 aa13.2□□□□□ -0.3
PLOD3-205ENST00000440925 DOCK7Q96N67 2140 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 SLC35F4A4IF30 521 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 CCL21O00585 134 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 LRRTM2O43300 516 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 SLC2A10O95528 541 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 PPP1R3DO95685 299 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 TXNDC12O95881 172 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 IGHMP01871 453 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 CD14P08571 375 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 AGTR1P30556 359 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 CDKN2AP42771 156 aaKnown RBP13.19□□□□□ -0.3
PLOD3-205ENST00000440925 PTDSS1P48651 473 aaKnown RBP13.19□□□□□ -0.3
PLOD3-205ENST00000440925 SELENOPP49908 381 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 FOXG1P55316 489 aaPredicted RBP13.19□□□□□ -0.3
PLOD3-205ENST00000440925 CLDN17P56750 224 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 NPRL3Q12980 569 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 GINS1Q14691 196 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 PTGES3Q15185 160 aaKnown RBP13.19□□□□□ -0.3
PLOD3-205ENST00000440925 RNPS1Q15287 305 aaKnown RBP13.19□□□□□ -0.3
PLOD3-205ENST00000440925 CLEC12AQ5QGZ9 265 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 RIPPLY2Q5TAB7 128 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 DPY19L2P2Q6ZN68 376 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 SLC35D2Q76EJ3 337 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 FJX1Q86VR8 437 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 TMEM123Q8N131 208 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 ASB10Q8WXI3 467 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 UBE2FQ969M7 185 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 NMD3Q96D46 503 aaKnown RBP13.19□□□□□ -0.3
PLOD3-205ENST00000440925 GMPPAQ96IJ6 420 aaPredicted RBP13.19□□□□□ -0.3
PLOD3-205ENST00000440925 KATNB1Q9BVA0 655 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 TSSK6Q9BXA6 273 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 PRRG4Q9BZD6 226 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 TXNIPQ9H3M7 391 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 POFUT2Q9Y2G5 429 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 NOX1Q9Y5S8 564 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 ARHGAP21Q5T5U3 1957 aa13.19□□□□□ -0.3
PLOD3-205ENST00000440925 PHF3Q92576 2039 aaKnown RBP13.18□□□□□ -0.3
PLOD3-205ENST00000440925 ZAR1LA6NP61 321 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 ARPC3O15145 178 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 SERPINI2O75830 405 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 PRPS1P60891 318 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 POU3F1Q03052 451 aaPredicted RBP13.18□□□□□ -0.3
PLOD3-205ENST00000440925 MELKQ14680 651 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 HIST3H3Q16695 136 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 LRFN4Q6PJG9 635 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 PTCHD4Q6ZW05 846 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 FAM214BQ7L5A3 538 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 UEVLDQ8IX04 471 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 LNX2Q8N448 690 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 ANKK1Q8NFD2 765 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 FANK1Q8TC84 345 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 ZNRF4Q8WWF5 429 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 HDAC2Q92769 488 aaKnown RBP13.18□□□□□ -0.3
PLOD3-205ENST00000440925 TMEM45BQ96B21 275 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 RASD2Q96D21 266 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 ZHX1-C8orf76Q96EF9 292 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 ZNF837Q96EG3 531 aaPredicted RBP13.18□□□□□ -0.3
PLOD3-205ENST00000440925 OR2M2Q96R28 347 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 TM9SF2Q99805 663 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 GABARAPL3Q9BY60 117 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 GRIP2Q9C0E4 1043 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 TOR3AQ9H497 397 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 GP6Q9HCN6 339 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 PLSCR4Q9NRQ2 329 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 RNF6Q9Y252 685 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 MYO7BQ6PIF6 2116 aa13.18□□□□□ -0.3
PLOD3-205ENST00000440925 RP1L1Q8IWN7 2480 aaPredicted RBP13.17□□□□□ -0.3
PLOD3-205ENST00000440925 IGKV1D-43A0A0B4J1Z2 117 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 NPIPB13A6NJU9 1138 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 UPK3AO75631 287 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 TRMUO75648 421 aaKnown RBP13.17□□□□□ -0.3
PLOD3-205ENST00000440925 OR6A2O95222 327 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 TMIGD3P0DMS9 266 aaPredicted RBP13.17□□□□□ -0.3
PLOD3-205ENST00000440925 ZNF43P17038 809 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 IGFBP5P24593 272 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 POU1F1P28069 291 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 GTF2E2P29084 291 aaKnown RBP13.17□□□□□ -0.3
PLOD3-205ENST00000440925 BIDP55957 195 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 RPL27P61353 136 aaKnown RBP13.17□□□□□ -0.3
PLOD3-205ENST00000440925 ESRRGP62508 458 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 ADARB1P78563 741 aaKnown RBP13.17□□□□□ -0.3
PLOD3-205ENST00000440925 IL1RL1Q01638 556 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 ESPL1Q14674 2120 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■■ 37.1
PLOD3-205ENST00000440925 MESTQ5EB52 335 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 SLC35F1Q5T1Q4 408 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 EEF1A1P5Q5VTE0 462 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 P4HA3Q7Z4N8 544 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 PACRGLQ8N7B6 248 aa13.17□□□□□ -0.3
PLOD3-205ENST00000440925 ARIH2OSQ8N7S6 290 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms