RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CLK1P49759 484 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ZNF41P51814 821 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TMED1Q13445 227 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TOMM34Q15785 309 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 LCN1P1Q5VSP4 162 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 OR5M10Q6IEU7 315 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TMEM81Q6P7N7 255 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 SLC16A12Q6ZSM3 486 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 MEPCEQ7L2J0 689 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 FGD2Q7Z6J4 655 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 IGFN1Q86VF2 1251 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 SLC22A16Q86VW1 577 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 LIPHQ8WWY8 451 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 MED12Q93074 2177 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 TMEM41AQ96HV5 264 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ENKD1Q9H0I2 346 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 ZNF229Q9UJW7 825 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 IER3IP1Q9Y5U9 82 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 WIF1Q9Y5W5 379 aa13.09□□□□□ -0.31
TNFRSF1A-204ENST00000440083 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 A8MVM7 634 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MCIDASD6RGH6 385 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 M0R082 166 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 IDH3BO43837 385 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SNX4O95219 450 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 APOL3O95236 402 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 WISP1O95388 367 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 AHSA1O95433 338 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 FREM3P0C091 2139 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TCEA1P23193 301 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GDF1P27539 372 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TGFBR2P37173 567 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SLC16A1P53985 500 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LGALS3BPQ08380 585 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CRMP1Q14194 572 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SPHARQ15513 63 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TSTQ16762 297 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 EIF2S3LQ2VIR3 472 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TIMM50Q3ZCQ8 353 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TIGD3Q6B0B8 471 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SHFQ7M4L6 423 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MAMDC2Q7Z304 686 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 JAZF1Q86VZ6 243 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 FAM109AQ8N4B1 249 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LRRC17Q8N6Y2 441 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 NANOGP1Q8N7R0 232 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 WDSUB1Q8N9V3 476 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 PROKR2Q8NFJ6 384 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 BBS1Q8NFJ9 593 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR52E2Q8NGJ4 325 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 STK35Q8TDR2 534 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 KTI12Q96EK9 354 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR5M11Q96RB7 305 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GPX7Q96SL4 187 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MGLLQ99685 303 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 KLHDC3Q9BQ90 382 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SLC6A15Q9H2J7 730 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ZDHHC11Q9H8X9 412 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TNFRSF10DQ9UBN6 386 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CHRNA9Q9UGM1 479 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 FBXL2Q9UKC9 423 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 HIF3AQ9Y2N7 669 aa13.08□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TMEM72A0PK05 275 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 BLOC1S5-TXNDC5H3BN57 136 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CCRL2O00421 344 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 AIREO43918 545 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MT-ATP6P00846 226 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ADRA2AP08913 450 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GTF2E2P29084 291 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 LIPAP38571 399 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 AQP2P41181 271 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RPS5P46782 204 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ITGADQ13349 1161 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SNTA1Q13424 505 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 GXYLT1Q4G148 440 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ALG10Q5BKT4 473 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 KLHL36Q8N4N3 616 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SLC37A3Q8NCC5 494 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 SDR9C7Q8NEX9 313 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR4K17Q8NGC6 315 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR51G2Q8NGK0 314 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MOGAT1Q96PD6 335 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 KATNB1Q9BVA0 655 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ASPNQ9BXN1 380 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OR51V1Q9H2C8 321 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MED20Q9H944 212 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 MED11Q9P086 117 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 CLEC2DQ9UHP7 191 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 OSGIN2Q9Y236 505 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 EXOGQ9Y2C4 368 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 RELNP78509 3460 aa13.07□□□□□ -0.32
TNFRSF1A-204ENST00000440083 A0A1B0GTH9 108 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TMEM129A0AVI4 362 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 ARPC3O15145 178 aa13.06□□□□□ -0.32
TNFRSF1A-204ENST00000440083 TRAPPC6AO75865 159 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms