RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.34□□□□□ -0.432e-8■■■□□ 18.7
HERPUD1-204ENST00000439977 SYT4Q9H2B2 425 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 CA10Q9NS85 328 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 SOHLH2Q9NX45 425 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ZNF69Q9UC07 566 aa12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 ELF5Q9UKW6 265 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-204ENST00000439977 MEIKINA0A087WXM9 373 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 EFCAB7A8K855 629 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 C17orf105B2RV13 164 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 PTH2RP49190 550 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 BLVRAP53004 296 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 UBE2MP61081 183 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 YPEL5P62699 121 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 EGR4Q05215 589 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 EXOSC2Q13868 293 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 ESCO2Q56NI9 601 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 UNQ9370/PRO34162Q6UXP9 181 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC35D2Q76EJ3 337 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 ARHGEF39Q8N4T4 335 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF563Q8TA94 476 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 FCAMRQ8WWV6 532 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 HOXB13Q92826 284 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 S100A16Q96FQ6 103 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 AMELYQ99218 206 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF436Q9C0F3 470 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 COPZ2Q9P299 210 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 MRPS33Q9Y291 106 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 KIR2DS5A0A0G2JLQ3 304 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 A0A0G2JNG1 304 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 KIR2DS3K7RE56 304 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 KRT33AO76009 404 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 TPOP07202 933 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF250P15622 560 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 OR1D4P47884 311 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 GFERP55789 205 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 C19orf57Q0VDD7 668 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 SNTA1Q13424 505 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 GAS6Q14393 721 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 KIR2DS5Q14953 304 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 TOMM34Q15785 309 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF74Q16587 644 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 LINC00303Q3SY05 128 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC35F3Q8IY50 421 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 PMM1Q92871 262 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 TGM7Q96PF1 710 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 NXF5Q9H1B4 397 aaKnown RBP12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 NOX3Q9HBY0 568 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 TAS2R10Q9NYW0 307 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 KLHL9Q9P2J3 617 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 CD207Q9UJ71 328 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 PCDHGA5Q9Y5G8 931 aa12.33□□□□□ -0.44
HERPUD1-204ENST00000439977 SPTY2D1-AS1A0A0U1RR47 76 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 ARPC3O15145 178 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 UPK3AO75631 287 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 PPM1BO75688 479 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 AKR7A3O95154 331 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 NUDT14O95848 222 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 HLA-DQA2P01906 255 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 ALDOBP05062 364 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 ITPKBP27987 946 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 P2RX1P51575 399 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 FOXL2P58012 376 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 TSPAN5P62079 268 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 RPL18Q07020 188 aaKnown RBP12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 GLB1L2Q8IW92 636 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 TMEM106AQ96A25 262 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC25A36Q96CQ1 311 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 C1QTNF6Q9BXI9 259 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 GRHPRQ9UBQ7 328 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 LAMP5Q9UJQ1 280 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 FOXJ3Q9UPW0 622 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 TICRRQ7Z2Z1 1910 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 G3V3Q6 166 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 I3L521 148 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 CD14P08571 375 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 RABIFP47224 123 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 PRPS1P60891 318 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 RPS4XP62701 263 aaKnown RBP12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 DYRK1AQ13627 763 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 KLHL26Q53HC5 615 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 HACD4Q5VWC8 232 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 NKAIN2Q5VXU1 208 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF782Q6ZMW2 699 aaPredicted RBP12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 FAM220AQ7Z4H9 259 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 CCDC28AQ8IWP9 274 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF676Q8N7Q3 588 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 ZNF615Q8N8J6 731 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 SUN5Q8TC36 379 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 NXPE2Q96DL1 559 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 TRAF4Q9BUZ4 470 aaPredicted RBP12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 MGAT4CQ9UBM8 478 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 SLC6A5Q9Y345 797 aa12.32□□□□□ -0.44
HERPUD1-204ENST00000439977 GSTZ1O43708 216 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 GPRIN2O60269 458 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 TACR3P29371 465 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 PRTGQ2VWP7 1150 aa12.31□□□□□ -0.44
HERPUD1-204ENST00000439977 MESTQ5EB52 335 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms