RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CAV3P56539 151 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 GLYR1Q49A26 553 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-216ENST00000437340 EEF1A1P5Q5VTE0 462 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 FAM69BQ5VUD6 431 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 OR5M10Q6IEU7 315 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 MZT2AQ6P582 158 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 ACOT12Q8WYK0 555 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 KIAA1143Q96AT1 154 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-216ENST00000437340 TSSK2Q96PF2 358 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 PRRX2Q99811 253 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 GRIP1Q9Y3R0 1128 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 XKRYO14609 159 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 ZNF208O43345 1280 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 IGHMP01871 453 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 ACVR1BP36896 505 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 RPL27P61353 136 aaKnown RBP23.22■■□□□ 1.31
CPNE1-216ENST00000437340 KCTD20Q7Z5Y7 419 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 CEACAM19Q7Z692 300 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 TIGD4Q8IY51 512 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 HAVCR2Q8TDQ0 301 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 DIRAS2Q96HU8 199 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 SRRQ9GZT4 340 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 RNF32Q9H0A6 362 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 ZNF700Q9H0M5 742 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 TXNIPQ9H3M7 391 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 SLC39A1Q9NY26 324 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 MED11Q9P086 117 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 PPP4R1LQ9P1A2 415 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 GNG8Q9UK08 70 aa23.22■■□□□ 1.31
CPNE1-216ENST00000437340 SMIM30A4D0T7 59 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 FTCDNL1E5RQL4 147 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 PLPP3O14495 311 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 DKK1O94907 266 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 OR6A2O95222 327 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 UMODP07911 640 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 MYL9P24844 172 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 EXT1Q16394 746 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 BTBD16Q32M84 506 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 ZNF684Q5T5D7 378 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 SLC6A19Q695T7 634 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 XKRXQ6PP77 449 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 ZNF554Q86TJ5 538 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 OR6V1Q8N148 313 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 ZNF511Q8NB15 262 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 ZNF519Q8TB69 540 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 SPACA9Q96E40 222 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-216ENST00000437340 OR11A1Q9GZK7 315 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 SRA1Q9HD15 236 aaKnown RBP23.21■■□□□ 1.31
CPNE1-216ENST00000437340 POLE4Q9NR33 117 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 RHBDL2Q9NX52 303 aa23.21■■□□□ 1.31
CPNE1-216ENST00000437340 AKAP7Q9P0M2 348 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-216ENST00000437340 PTRH2Q9Y3E5 179 aaKnown RBP23.21■■□□□ 1.31
CPNE1-216ENST00000437340 IGHV1-45A0A0A0MS14 117 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 C2orf72A6NCS6 295 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 FAM171A2A8MVW0 826 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 B4DXG7 233 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 DVL2O14641 736 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 ARHGEF9O43307 516 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 GPRIN2O60269 458 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 KLF7O75840 302 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-216ENST00000437340 PTGDSP41222 190 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 GDI2P50395 445 aaKnown RBP23.2■■□□□ 1.3
CPNE1-216ENST00000437340 ZNF79Q15937 498 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 CSRP2Q16527 193 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 ACSM3Q53FZ2 586 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 SLC25A53Q5H9E4 307 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 LYPD4Q6UWN0 246 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 MFSD8Q8NHS3 518 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 RPS4Y2Q8TD47 263 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 RASL10BQ96S79 203 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 CMKLR1Q99788 373 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 TTTY10Q9BZA0 68 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 WIF1Q9Y5W5 379 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 B3GALT1Q9Y5Z6 326 aa23.2■■□□□ 1.3
CPNE1-216ENST00000437340 FABP12A6NFH5 140 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 C11orf98E9PRG8 122 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 DCTN6O00399 190 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 CENPAP49450 140 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 MRPL28Q13084 256 aaKnown RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 ACKR1Q16570 336 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 HBMQ6B0K9 141 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 METAP1DQ6UB28 335 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 FAM131AQ6UXB0 335 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 OR10G3Q8NGC4 313 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 OR2Y1Q8NGV0 311 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 SETD6Q8TBK2 473 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 KCTD12Q96CX2 325 aaKnown RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 IMMP1LQ96LU5 166 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 METTL7AQ9H8H3 244 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 MARCH7Q9H992 704 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 FKBP7Q9Y680 259 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 PCNX3Q9H6A9 2034 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 MAGEB4O15481 346 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 GATBO75879 557 aaKnown RBP23.19■■□□□ 1.3
CPNE1-216ENST00000437340 NCR1O76036 304 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 TACSTD2P09758 323 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 AHCYP23526 432 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 SHC1P29353 583 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 CDC20BQ86Y33 519 aa23.19■■□□□ 1.3
CPNE1-216ENST00000437340 GDPD1Q8N9F7 314 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms