RNA–Protein interactions for RNA: ENST00000432945.1

HMGN1P33-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 33, humanhuman

BASIC

Gene HMGN1P33, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P33-201ENST00000432945 CATSPER2Q96P56 530 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 RASL11BQ9BPW5 248 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 MLPHQ9BV36 600 aaPredicted RBP0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 OR10A4Q9H209 315 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 PORCNQ9H237 461 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 SPNS1Q9H2V7 528 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 FAM124BQ9H5Z6 455 aaPredicted RBP0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 CALHM2Q9HA72 323 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 RNPEPL1Q9HAU8 725 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 IL1RAPL2Q9NP60 686 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 DNAJC17Q9NVM6 304 aaKnown RBP0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 DUS2Q9NX74 493 aaKnown RBP0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 GDAP2Q9NXN4 497 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 RBAKQ9NYW8 714 aaPredicted RBP0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 C5AR2Q9P296 337 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 MTRF1LQ9UGC7 380 aaKnown RBP0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 ASF1AQ9Y294 204 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 PLLPQ9Y342 182 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 SAMHD1Q9Y3Z3 626 aaKnown RBP0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 YTHDF2Q9Y5A9 579 aaKnown RBP0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 FKBP7Q9Y680 259 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 MAD1L1Q9Y6D9 718 aa0.48□□□□□ -2.33
HMGN1P33-201ENST00000432945 MYH13Q9UKX3 1938 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 IGLV11-55A0A075B6I3 123 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 IGKV2-24A0A0C4DH68 120 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 COLCA2A8K830 154 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ZNF878C9JN71 531 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 CACNB4O00305 520 aaPredicted RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 SLC28A1O00337 649 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ZNF263O14978 683 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 P4HA2O15460 535 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 STX6O43752 255 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 TBCAO75347 108 aaKnown RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 VAMP5O95183 116 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 CHRNGP07510 517 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 GIPP09681 153 aaPredicted RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 IQCF3P0C7M6 154 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 POLR2MP0CAP2 368 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 POU2F1P14859 743 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ZNF18P17022 549 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 PAX3P23760 479 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 NUMBP49757 651 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 PPP5CP53041 499 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 MTTPP55157 894 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 SNU13P55769 128 aaKnown RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 PRPS1P60891 318 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ST8SIA6P61647 398 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 RPS6P62753 249 aaKnown RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 VLDLRP98155 873 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 CNTN2Q02246 1040 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 CHRNB3Q05901 458 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 TFCP2Q12800 502 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 MADCAM1Q13477 382 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 CDKN3Q16667 212 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 KRTAP20-2Q3LI61 65 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 KRTAP13-4Q3LI77 160 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ANKRD20A8PQ5CZ79 823 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 BEND6Q5SZJ8 279 aaPredicted RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 NKAIN2Q5VXU1 208 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ZNF57Q68EA5 555 aaPredicted RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 OR8G2PQ6IF36 304 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 GALNT17Q6IS24 598 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 SCYL2Q6P3W7 929 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 CFAP161Q6P656 301 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 UNC5DQ6UXZ4 953 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 STRADAQ7RTN6 431 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 BHLHA15Q7RTS1 189 aaPredicted RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 P4HA3Q7Z4N8 544 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ASPGQ86U10 573 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 SLC22A16Q86VW1 577 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 SERPINA9Q86WD7 417 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 PCP2Q8IVA1 136 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 TUSC5Q8IXB3 177 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 PEX5LQ8IYB4 626 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 UXS1Q8NBZ7 420 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ST6GALNAC3Q8NDV1 305 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 OR52I1Q8NGK6 324 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 DEPDC1BQ8WUY9 529 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 TMEM37Q8WXS4 190 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 OR10C1Q96KK4 312 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ACCSQ96QU6 501 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 TEX13AQ9BXU3 409 aaPredicted RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 ANKRD2Q9GZV1 360 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 MAGT1Q9H0U3 335 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 TSPYL1Q9H0U9 437 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 TRPV6Q9H1D0 765 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 C8orf33Q9H7E9 229 aaPredicted RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 MAGEF1Q9HAY2 307 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 POLD4Q9HCU8 107 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 SIRT7Q9NRC8 400 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 SOHLH2Q9NX45 425 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 NKIRAS2Q9NYR9 191 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 NRBP1Q9UHY1 535 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 GGA2Q9UJY4 613 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 APPL1Q9UKG1 709 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 UBQLN1Q9UMX0 589 aaKnown RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 EIF3LQ9Y262 564 aaKnown RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 EXOSC1Q9Y3B2 195 aaKnown RBP0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 MAB21L2Q9Y586 359 aa0.47□□□□□ -2.33
HMGN1P33-201ENST00000432945 POMT1Q9Y6A1 747 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms