RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 OR52A5Q9H2C5 316 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 OR51B6Q9H340 312 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 CENPHQ9H3R5 247 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 WDR55Q9H6Y2 383 aaPredicted RBP2.16□□□□□ -2.06
CLK1-204ENST00000432425 C12orf10Q9HB07 376 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 NT5MQ9NPB1 228 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 CCNB1IP1Q9NPC3 277 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 ZNF175Q9Y473 711 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 CACNG2Q9Y698 323 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 NEURL4Q96JN8 1562 aa2.16□□□□□ -2.06
CLK1-204ENST00000432425 A0A1B0GW15 77 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 A0A1W2PQ67 120 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 PDLIM1O00151 329 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 DLGAP1O14490 977 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 OR7A17O14581 309 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ITGB1BP1O14713 200 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 KDELR3O43731 214 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 OR1F1O43749 312 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 PSIP1O75475 530 aaKnown RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 RAB3DO95716 219 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 SNAI1O95863 264 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 SNRPAP09012 282 aaKnown RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 RD3LP0DJH9 198 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 CALM1P0DP23 149 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 CALM2P0DP24 149 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 CALM3P0DP25 149 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 RRASP10301 218 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 SDC1P18827 310 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ATF6P18850 670 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 FUT3P21217 361 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 GSTM3P21266 225 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 PSMA2P25787 234 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 HTR2AP28223 471 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 HNRNPH3P31942 346 aaKnown RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 NAA10P41227 235 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 CDKN2CP42773 168 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 STK19P49842 368 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 PPT1P50897 306 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 CDH6P55285 790 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 C21orf59P57076 290 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ACTBP60709 375 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 PRPS1P60891 318 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ACTA2P62736 377 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ACTG1P63261 375 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ACTG2P63267 376 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ACTC1P68032 377 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ACTA1P68133 377 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 FGL1Q08830 312 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 STX3Q13277 289 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 USF2Q15853 346 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 PRR4Q16378 134 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 TPD52L1Q16890 204 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 ZSWIM7Q19AV6 140 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 MARCH8Q5T0T0 291 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 LCE1CQ5T751 118 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 MFSD14CQ5VZR4 134 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 NIPAL3Q6P499 406 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 TTC33Q6PID6 262 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 RTL4Q6ZR62 310 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 TRPM8Q7Z2W7 1104 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 FAM122BQ7Z309 247 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 GTPBP8Q8N3Z3 284 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 LRRC17Q8N6Y2 441 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 COLGALT1Q8NBJ5 622 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 HTR3CQ8WXA8 447 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ARNTL2Q8WYA1 636 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 TM4SF19Q96DZ7 209 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 DNAJA3Q96EY1 480 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 CERS2Q96G23 380 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 CBWD1Q9BRT8 395 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 RAB1BQ9H0U4 201 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 Q9H3A6 140 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 GOLPH3Q9H4A6 298 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 ALG9Q9H6U8 611 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 C12orf4Q9NQ89 552 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 MRPL39Q9NYK5 338 aaKnown RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 TAS2R7Q9NYW3 318 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 SLC17A7Q9P2U7 560 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 P2RX2Q9UBL9 471 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 LHX3Q9UBR4 397 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 WARS2Q9UGM6 360 aaKnown RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 PURGQ9UJV8 347 aaKnown RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 RASD1Q9Y272 281 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 AP3M1Q9Y2T2 418 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 KLHDC2Q9Y2U9 406 aa2.15□□□□□ -2.06
CLK1-204ENST00000432425 SAMHD1Q9Y3Z3 626 aaKnown RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 POLR3AO14802 1390 aaPredicted RBP2.15□□□□□ -2.06
CLK1-204ENST00000432425 TRAV26-1A0A087WT03 109 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 FAM240BA0A1B0GVZ2 78 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 GSTTP1A0A1W2PQM5 241 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 RAB19A4D1S5 217 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 LRIT2A6NDA9 550 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 SMCO2A6NFE2 343 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 NPIPA2E9PIF3 369 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 PRAMEF26H0Y7S4 382 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 NBR2O15453 112 aa2.15□□□□□ -2.07
CLK1-204ENST00000432425 ZSCAN12O43309 604 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms