RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 DUX4L6P0CJ89 424 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 DUX4L7P0CJ90 424 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 GNSP15586 552 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 EGR1P18146 543 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 SLC11A1P49279 550 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 CTSCP53634 463 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 NRG3P56975 720 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 OR10A3P58181 314 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 SEC61A1P61619 476 aaKnown RBP7.38□□□□□ -1.23
VTI1A-202ENST00000432306 ACTC1P68032 377 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 ACTA1P68133 377 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 E2F1Q01094 437 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 SCGB2A2Q13296 93 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 CEBPEQ15744 281 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 UBE2NLQ5JXB2 153 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 CLVS2Q5SYC1 327 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 UNQ9370/PRO34162Q6UXP9 181 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 GDPD4Q6W3E5 623 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 B3GLCTQ6Y288 498 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 Q6ZTK2 550 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 ESPNLQ6ZVH7 1005 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 CHMP1BQ7LBR1 199 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 TMEM150AQ86TG1 271 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 C1orf210Q8IVY1 113 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 MMP21Q8N119 569 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 SLC39A11Q8N1S5 342 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 LNX2Q8N448 690 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 C7orf57Q8NEG2 295 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 CPT1CQ8TCG5 803 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 RPS4Y2Q8TD47 263 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 ST7LQ8TDW4 575 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 THEM6Q8WUY1 208 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 CNOT9Q92600 299 aaKnown RBP7.38□□□□□ -1.23
VTI1A-202ENST00000432306 MRPS31Q92665 395 aaKnown RBP7.38□□□□□ -1.23
VTI1A-202ENST00000432306 RIT1Q92963 219 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 GLYATL1Q969I3 302 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 C3orf49Q96BT1 292 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 ELMOD3Q96FG2 381 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 LRFN5Q96NI6 719 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 NPAS1Q99742 590 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 DPH7Q9BTV6 452 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 TINAGL1Q9GZM7 467 aaPredicted RBP7.38□□□□□ -1.23
VTI1A-202ENST00000432306 SPACA1Q9HBV2 294 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 NGBQ9NPG2 151 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 LHX9Q9NQ69 397 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 SLC39A1Q9NY26 324 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 NLGN3Q9NZ94 848 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 DUX4Q9UBX2 424 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 PURGQ9UJV8 347 aaKnown RBP7.38□□□□□ -1.23
VTI1A-202ENST00000432306 PPIEQ9UNP9 301 aaKnown RBP7.38□□□□□ -1.23
VTI1A-202ENST00000432306 IRAK3Q9Y616 596 aa7.38□□□□□ -1.23
VTI1A-202ENST00000432306 CHD6Q8TD26 2715 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 PCM1Q15154 2024 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 USP24Q9UPU5 2620 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 ANKRD20A5PA0PJZ0 165 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 PQLC2LA1A4F0 135 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 OR2AG2A6NM03 316 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 J3QW42 95 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 TNFSF14O43557 240 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 DNPH1O43598 174 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SIGLEC6O43699 453 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 CREBL2O60519 120 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 RHBDL1O75783 438 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 TGFAP01135 160 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 URODP06132 367 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 LIPFP07098 398 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 MELTFP08582 738 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 ADRB1P08588 477 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 RPA2P15927 270 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 ATF1P18846 271 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 NT5EP21589 574 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SLC2A5P22732 501 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 ATP5A1P25705 553 aaKnown RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 MAOBP27338 520 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 ACADLP28330 430 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 DLX5P56178 289 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 TAS2R41P59536 307 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 RAB8AP61006 207 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SSTP61278 116 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 FGL1Q08830 312 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 ILF3Q12906 894 aaKnown RBP eCLIP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SLC25A35Q3KQZ1 300 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 IL20RBQ6UXL0 311 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 NUDT13Q86X67 352 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 PDZD9Q8IXQ8 264 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 RNF113BQ8IZP6 322 aaKnown RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SYS1Q8N2H4 156 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 DTX3Q8N9I9 347 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SUMF1Q8NBK3 374 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 BBS1Q8NFJ9 593 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 NSMAFQ92636 917 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 MRPS24Q96EL2 167 aaKnown RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 CXorf58Q96LI9 332 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SAMD8Q96LT4 415 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 AMDHD1Q96NU7 426 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 WNT10AQ9GZT5 417 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SPRTNQ9H040 489 aaPredicted RBP7.37□□□□□ -1.23
VTI1A-202ENST00000432306 SLC38A1Q9H2H9 487 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 UBQLN3Q9H347 655 aa7.37□□□□□ -1.23
VTI1A-202ENST00000432306 GLIPR2Q9H4G4 154 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms