RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SPAARA0A1B0GVQ0 90 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 A0A1W2PNU3 283 aaPredicted RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 ANKRD61A6NGH8 418 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 VSTM2BA6NLU5 285 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 ZNF879B4DU55 563 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 PHYHO14832 338 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 SELENOFO60613 162 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 DKK1O94907 266 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 HLA-DQB1P01920 261 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 RAB3BP20337 219 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 EDNRAP25101 427 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 AZGP1P25311 298 aaKnown RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 EIF2B2P49770 351 aaKnown RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 SUMO3P55854 103 aaPredicted RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 QPRTQ15274 297 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 SGCBQ16585 318 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 GXYLT1Q4G148 440 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 FAM69AQ5T7M9 428 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 MZT2BQ6NZ67 158 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 SFXN4Q6P4A7 337 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 UNQ9370/PRO34162Q6UXP9 181 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 FAM220AQ7Z4H9 259 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 NRARPQ7Z6K4 114 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 GLRX5Q86SX6 157 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 AKAP14Q86UN6 197 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 Q8N402 240 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 DUSP19Q8WTR2 217 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 SMAP2Q8WU79 429 aaPredicted RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 PMEPA1Q969W9 287 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 RTN4RQ9BZR6 473 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 ZCCHC4Q9H5U6 513 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 ABRACLQ9P1F3 81 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 C19orf25Q9UFG5 118 aaPredicted RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 ZNF346Q9UL40 294 aaKnown RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 TMED7Q9Y3B3 224 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 TMEM14AQ9Y6G1 99 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 FER1L5A0AVI2 2057 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 RIF1Q5UIP0 2472 aaKnown RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 HSPB2A8KAH6 182 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 XKRYO14609 159 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 PDCD5O14737 125 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 SCO2O43819 266 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 SUSD5O60279 629 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 OR6A2O95222 327 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 TIAF1O95411 115 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 F13BP05160 661 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 UCHL1P09936 223 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 MAP2K6P52564 334 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 OR2B6P58173 313 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 MFSD13AQ14CX5 517 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 TRIP6Q15654 476 aaKnown RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 TOMM34Q15785 309 aaPredicted RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 HSPB2Q16082 182 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 PHF19Q5T6S3 580 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 CDCP2Q5VXM1 449 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 PWWP2BQ6NUJ5 590 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 ZNF544Q6NX49 715 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 DHRS13Q6UX07 377 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 RPTNQ6XPR3 784 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 PPP1R3BQ86XI6 285 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 ADGRG3Q86Y34 549 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 ZBTB8BQ8NAP8 495 aaPredicted RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 ZNRF4Q8WWF5 429 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 ST8SIA1Q92185 356 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 TTC9Q92623 222 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 CMTM3Q96MX0 182 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 CDC6Q99741 560 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 SLC26A1Q9H2B4 701 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 SRA1Q9HD15 236 aaKnown RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 APMAPQ9HDC9 416 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 INIPQ9NRY2 104 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 CYSLTR2Q9NS75 346 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 OCIAD1Q9NX40 245 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 TAS2R5Q9NYW4 299 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 RABL2AQ9UBK7 228 aaPredicted RBP11.62□□□□□ -0.55
DDX56-204ENST00000431640 TEKT2Q9UIF3 430 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 RABL2BQ9UNT1 228 aa11.62□□□□□ -0.55
DDX56-204ENST00000431640 KIF26BQ2KJY2 2108 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 ARPC4-TTLL3A0A0A6YYG9 625 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 A0A1W2PRG6 482 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 ANKUB1A6NFN9 424 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 NOTOA8MTQ0 251 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 GFRA3O60609 400 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 NPIPB7O75200 414 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
DDX56-204ENST00000431640 AHSA1O95433 338 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 PRKAR1AP10644 381 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 PRKCAP17252 672 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 NPR2P20594 1047 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 APEX1P27695 318 aaKnown RBP11.61□□□□□ -0.55
DDX56-204ENST00000431640 MSX1P28360 303 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 RFX2P48378 723 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 INPP1P49441 399 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 IL11RAQ14626 422 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 YIF1BQ5BJH7 314 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 ZNF684Q5T5D7 378 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 EEF1A1P5Q5VTE0 462 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 C1orf140Q5VVS0 124 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 AGAP6Q5VW22 663 aa11.61□□□□□ -0.55
DDX56-204ENST00000431640 SHISA6Q6ZSJ9 500 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms