RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 NUDT13Q86X67 352 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 DCUN1D3Q8IWE4 304 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 FOXRED2Q8IWF2 684 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 APCDD1Q8J025 514 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ASCC1Q8N9N2 400 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 DBF4BQ8NFT6 615 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 TTLQ8NG68 377 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 LILRB4Q8NHJ6 448 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 TEX47Q8TBZ9 253 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 WFDC5Q8TCV5 224 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SFXN5Q8TD22 340 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 CXorf40AQ8TE69 158 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 OR5P2Q8WZ92 322 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 MR1Q95460 341 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 GLYATL1Q969I3 302 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 OTUB2Q96DC9 234 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 NEURL3Q96EH8 262 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 EGLN2Q96KS0 407 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SLC35G5Q96KT7 338 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 LINC00615Q96LM1 132 aaPredicted RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ZNF354BQ96LW1 612 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 PRRC1Q96M27 445 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 KCTD7Q96MP8 289 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 OPALINQ96PE5 141 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 AIF1LQ9BQI0 150 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 RHNO1Q9BSD3 238 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 MED18Q9BUE0 208 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 RAB11FIP5Q9BXF6 653 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ATG10Q9H0Y0 220 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 OR51E2Q9H255 320 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ANKRD19PQ9H560 264 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 GAREM1Q9H706 876 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 NMNAT1Q9HAN9 279 aaPredicted RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SLC25A19Q9HC21 320 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 RPRD1BQ9NQG5 326 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 POLE4Q9NR33 117 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 MBNL1Q9NR56 388 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 GKN1Q9NS71 199 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 ZNF226Q9NYT6 803 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 GDE1Q9NZC3 331 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 CALML5Q9NZT1 146 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 SEC14L3Q9UDX4 400 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 DIMT1Q9UNQ2 313 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 EXO1Q9UQ84 846 aaKnown RBP4.53□□□□□ -1.68
LINC00458-202ENST00000427299 UTRNP46939 3433 aa4.53□□□□□ -1.68
LINC00458-202ENST00000427299 LNP1A1A4G5 178 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 CPED1A4D0V7 1026 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 A4D1N5 150 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 OR2AG2A6NM03 316 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 GABRR3A8MPY1 467 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 K7ERQ8 282 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 VCYO14598 125 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 SLC9A3R1O14745 358 aaPredicted RBP4.52□□□□□ -1.69
LINC00458-202ENST00000427299 SPRY1O43609 319 aaPredicted RBP4.52□□□□□ -1.69
LINC00458-202ENST00000427299 PLRG1O43660 514 aaKnown RBP4.52□□□□□ -1.69
LINC00458-202ENST00000427299 VEGFDO43915 354 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 TPST2O60704 377 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 SLC19A2O60779 497 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 SLC16A8O95907 504 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 HLA-DQB1P01920 261 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 BCHEP06276 602 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 IL3P08700 152 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 TSPAN19P0C672 248 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 C1GALT1C1LP0DN25 315 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 IL7P13232 177 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 ZNF24P17028 368 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 GALP22466 123 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 GTF2E2P29084 291 aaKnown RBP4.52□□□□□ -1.69
LINC00458-202ENST00000427299 EPHA2P29317 976 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 ERP29P30040 261 aaKnown RBP4.52□□□□□ -1.69
LINC00458-202ENST00000427299 GABRA5P31644 462 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 CD70P32970 193 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 EIF2S3P41091 472 aaKnown RBP4.52□□□□□ -1.69
LINC00458-202ENST00000427299 GLIPR1P48060 266 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 LIMK1P53667 647 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 CRYBA2P53672 197 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 MAPK12P53778 367 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 PRMT2P55345 433 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 ST8SIA6P61647 398 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 MRPS34P82930 218 aaKnown RBP4.52□□□□□ -1.69
LINC00458-202ENST00000427299 C2orf80Q0P641 193 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 RPA4Q13156 261 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 ILKQ13418 452 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 CDK10Q15131 360 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 TRAM1Q15629 374 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 HSD17B12Q53GQ0 312 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 SLC25A30Q5SVS4 291 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 FAM69BQ5VUD6 431 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 HACD4Q5VWC8 232 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 FAM131AQ6UXB0 335 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 CEACAM20Q6UY09 585 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 TMEM64Q6YI46 380 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 HDDC2Q7Z4H3 204 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 SMIM29Q86T20 159 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 C17orf64Q86WR6 236 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 TMEM173Q86WV6 379 aaPredicted RBP4.52□□□□□ -1.69
LINC00458-202ENST00000427299 TRAPPC5Q8IUR0 188 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 UBQLNLQ8IYU4 475 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 TCTE3Q8IZS6 198 aa4.52□□□□□ -1.69
LINC00458-202ENST00000427299 SLC34A3Q8N130 599 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms