RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 Q6ZTK2 550 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 RHOXF1Q8NHV9 184 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 SEMA4CQ9C0C4 833 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 TXNRD2Q9NNW7 524 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 AQP7P3A6NL99 342 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF487B1APH4 448 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 ADAM12O43184 909 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 NPY4RP50391 375 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 ZNF91Q05481 1191 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 RING1Q06587 406 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 VEZF1Q14119 521 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 FAM26DQ5JW98 314 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 PXDC1Q5TGL8 231 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 RPL7L1Q6DKI1 246 aaKnown RBP11.65□□□□□ -0.54
HDLBP-214ENST00000427183 FRMPD2BQ6IN97 320 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 TMEM182Q6ZP80 229 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-214ENST00000427183 LINC00346Q8IVM7 164 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 SIAH3Q8IW03 269 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 FBXO8Q9NRD0 319 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 TM7SF3Q9NS93 570 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 CDHR4A6H8M9 788 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 P2RY10O00398 339 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 PDGFAP04085 211 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 APEX1P27695 318 aaKnown RBP11.65□□□□□ -0.54
HDLBP-214ENST00000427183 Q1RN00 199 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 Q6ZSR6 202 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 OR56B1Q8NGI3 324 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 CCDC74BQ96LY2 380 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 ULBP3Q9BZM4 244 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 MED9Q9NWA0 146 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 USP22Q9UPT9 525 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 GOLT1BQ9Y3E0 138 aa11.65□□□□□ -0.54
HDLBP-214ENST00000427183 COL2A1P02458 1487 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-214ENST00000427183 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.55
HDLBP-214ENST00000427183 NME2P1O60361 137 aa11.65□□□□□ -0.55
HDLBP-214ENST00000427183 CPN1P15169 458 aa11.65□□□□□ -0.55
HDLBP-214ENST00000427183 TAF9Q16594 264 aa11.65□□□□□ -0.55
HDLBP-214ENST00000427183 C4orf17Q53FE4 359 aa11.65□□□□□ -0.55
HDLBP-214ENST00000427183 GATA6Q92908 595 aa11.65□□□□□ -0.55
HDLBP-214ENST00000427183 PGAP3Q96FM1 320 aaPredicted RBP11.65□□□□□ -0.55
HDLBP-214ENST00000427183 NTMT1Q9BV86 223 aa11.65□□□□□ -0.55
HDLBP-214ENST00000427183 PIAS3Q9Y6X2 628 aa11.65□□□□□ -0.55
HDLBP-214ENST00000427183 EDIL3O43854 480 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 OR2J3O76001 311 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 HPNP05981 417 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 SRP9P49458 86 aaKnown RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 NTHL1P78549 312 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 SELPLGQ14242 412 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 TMEM176BQ3YBM2 270 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 WBP2NLQ6ICG8 309 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 TBPL2Q6SJ96 375 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 OR52E1Q8NGJ3 308 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 TANKQ92844 425 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 KHSRPQ92945 711 aaKnown RBP eCLIP11.64□□□□□ -0.551e-15■■■■□ 26.7
HDLBP-214ENST00000427183 C3orf30Q96M34 536 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 SYT17Q9BSW7 474 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 LMF2Q9BU23 707 aaKnown RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 CNOT2Q9NZN8 540 aaKnown RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 A0A0J9YY10 115 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 OR6C68A6NDL8 312 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 G3V3Y1 287 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 OR2C1O95371 312 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 MMP2P08253 660 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 CD68P34810 354 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 ADPRMQ3LIE5 342 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 MMP21Q8N119 569 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 OR6V1Q8N148 313 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 OR5B3Q8NH48 314 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 HAVCR2Q8TDQ0 301 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 SLC35B4Q969S0 331 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 EGLN2Q96KS0 407 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 CENPOQ9BU64 300 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 NMES1Q9C002 83 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 SFXN1Q9H9B4 322 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 TAS2R5Q9NYW4 299 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 BIDP55957 195 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 PMPCAQ10713 525 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 PDZK1IP1Q13113 114 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 EXOSC2Q13868 293 aaKnown RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 MPPED2Q15777 294 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 PRAMEF20Q5VT98 475 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 RPL22L1Q6P5R6 122 aaKnown RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 PRSS45Q7RTY3 260 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 BCDIN3DQ7Z5W3 292 aaKnown RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 KCNRGQ8N5I3 272 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 OR2G3Q8NGZ4 309 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 MARC2Q969Z3 335 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 ZNF597Q96LX8 424 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 POFUT1Q9H488 388 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 TUBB1Q9H4B7 451 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 TMEM231Q9H6L2 316 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 IL26Q9NPH9 171 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 SLC35D1Q9NTN3 355 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 DCAF16Q9NXF7 216 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 GNB1P62873 340 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 MAT1AQ00266 395 aaKnown RBP11.64□□□□□ -0.55
HDLBP-214ENST00000427183 RAB33AQ14088 237 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 TOR2AQ5JU69 321 aa11.64□□□□□ -0.55
HDLBP-214ENST00000427183 GHSRQ92847 366 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms