RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CLDN4O14493 209 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 KRT33AO76009 404 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 OR7A10O76100 309 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 IGKV1D-16P01601 117 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 ZP2Q05996 745 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 ALG11Q2TAA5 492 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 DEFB133Q30KQ1 61 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 ALG10Q5BKT4 473 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 KCTD9Q7L273 389 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 GALNT11Q8NCW6 608 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 OR5M1Q8NGP8 315 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP42-203ENST00000426246 KLHL9Q9P2J3 617 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 VDAC3Q9Y277 283 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 SLC22A7Q9Y694 548 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 PHF3Q92576 2039 aaKnown RBP12.22□□□□□ -0.45
USP42-203ENST00000426246 TPRP12270 2363 aaKnown RBP12.22□□□□□ -0.45
USP42-203ENST00000426246 A6NCN8 305 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 KCNJ13O60928 360 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 HNRNPA2B1P22626 353 aaKnown RBP12.22□□□□□ -0.45
USP42-203ENST00000426246 LINC00303Q3SY05 128 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 LINC00346Q8IVM7 164 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 GLB1L2Q8IW92 636 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 PM20D2Q8IYS1 436 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 OR5AK2Q8NH90 309 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 LMX1AQ8TE12 382 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 NXPE2Q96DL1 559 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 AHCYL2Q96HN2 611 aaKnown RBP12.22□□□□□ -0.45
USP42-203ENST00000426246 GPR27Q9NS67 375 aa12.22□□□□□ -0.45
USP42-203ENST00000426246 C19orf53Q9UNZ5 99 aaPredicted RBP12.22□□□□□ -0.45
USP42-203ENST00000426246 DOCK7Q96N67 2140 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 TCRBV16S1A1N1A0A5B0 115 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 UBE2QL1A1L167 161 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 C2orf74A8MZ97 194 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 H3BML4 177 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 PDGFAP04085 211 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 NANOS3P60323 173 aaKnown RBP12.21□□□□□ -0.45
USP42-203ENST00000426246 ETFDHQ16134 617 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 TMEM44Q2T9K0 475 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 ARHGAP11AQ6P4F7 1023 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 CORO6Q6QEF8 472 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 MED25Q71SY5 747 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 MS4A15Q8N5U1 240 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 ACOT12Q8WYK0 555 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 OR11A1Q9GZK7 315 aa12.21□□□□□ -0.45
USP42-203ENST00000426246 ELL3Q9HB65 397 aaPredicted RBP12.21□□□□□ -0.45
USP42-203ENST00000426246 OIP5O43482 229 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 THEGLP0DJG4 465 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 FRKP42685 505 aaPredicted RBP12.21□□□□□ -0.46
USP42-203ENST00000426246 NR0B1P51843 470 aaKnown RBP12.21□□□□□ -0.46
USP42-203ENST00000426246 AKR1D1P51857 326 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 SKP1P63208 163 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 EEF1A1P68104 462 aaKnown RBP12.21□□□□□ -0.46
USP42-203ENST00000426246 PITPNAQ00169 270 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 DUSP8Q13202 625 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 TAF13Q15543 124 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 FCRL6Q6DN72 434 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 SYT13Q7L8C5 426 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 C9orf62Q8N4C0 152 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 METTL21AQ8WXB1 218 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 C10orf90Q96M02 699 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 SFXN2Q96NB2 322 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 MCCC2Q9HCC0 563 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 CA10Q9NS85 328 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 SATB2Q9UPW6 733 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 HEBP2Q9Y5Z4 205 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 V9GY05 133 aa12.21□□□□□ -0.46
USP42-203ENST00000426246 C13orf42A0A1B0GVH6 325 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 C17orf105B2RV13 164 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 SPI1P17947 270 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 PRKACBP22694 351 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 MAP3K8P41279 467 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 CDKN2AP42771 156 aaKnown RBP12.2□□□□□ -0.46
USP42-203ENST00000426246 LIMK1P53667 647 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 NRG3P56975 720 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 OR4D10Q8NGI6 311 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 C16orf52Q8NHV5 167 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 NPRL2Q8WTW4 380 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 UBQLN2Q9UHD9 624 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 PCOLCE2Q9UKZ9 415 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 CNOT1A5YKK6 2376 aaKnown RBP12.2□□□□□ -0.46
USP42-203ENST00000426246 AGR2O95994 175 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 IFNA7P01567 189 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 CXCR1P25024 350 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 RBMS1P29558 406 aaKnown RBP12.2□□□□□ -0.46
USP42-203ENST00000426246 PTGS2P35354 604 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 GFERP55789 205 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 UBXN2BQ14CS0 331 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 LGALSLQ3ZCW2 172 aaPredicted RBP12.2□□□□□ -0.46
USP42-203ENST00000426246 TEX261Q6UWH6 196 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 CDX2Q99626 313 aaPredicted RBP12.2□□□□□ -0.46
USP42-203ENST00000426246 RANBP3Q9H6Z4 567 aaPredicted RBP12.2□□□□□ -0.46
USP42-203ENST00000426246 SEC61A2Q9H9S3 476 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 MRPS33Q9Y291 106 aaKnown RBP12.2□□□□□ -0.46
USP42-203ENST00000426246 U3KQ87 197 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 SCDO00767 359 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 SLC16A7O60669 478 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 ITGA10O75578 1167 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 SEMA4FO95754 770 aa12.2□□□□□ -0.46
USP42-203ENST00000426246 PSMB1P20618 241 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 207.3 ms