RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 PCSK5Q92824 1860 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 A0A1W2PRG6 482 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 C11orf98E9PRG8 122 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 CDK2AP1O14519 115 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 XKRYO14609 159 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 CBR3O75828 277 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 P04436 131 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 TFPIP10646 304 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 CD53P19397 219 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 SDHBP21912 280 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 RBMS1P29558 406 aaKnown RBP12.98□□□□□ -0.33
CDK3-201ENST00000425876 GABRA5P31644 462 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 ZNF85Q03923 595 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 HSF2Q03933 536 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 OR7A5Q15622 319 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 MOGQ16653 247 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 GLYR1Q49A26 553 aaPredicted RBP12.98□□□□□ -0.33
CDK3-201ENST00000425876 DCAF10Q5QP82 559 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 EEF1A1P5Q5VTE0 462 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 B3GNTL1Q67FW5 361 aaPredicted RBP12.98□□□□□ -0.33
CDK3-201ENST00000425876 CD200R1LQ6Q8B3 271 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 IL22RA1Q8N6P7 574 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 MRPL48Q96GC5 212 aaKnown RBP12.98□□□□□ -0.33
CDK3-201ENST00000425876 THOC3Q96J01 351 aaKnown RBP12.98□□□□□ -0.33
CDK3-201ENST00000425876 ALG12Q9BV10 488 aa12.98□□□□□ -0.33
CDK3-201ENST00000425876 RPRD1BQ9NQG5 326 aaKnown RBP12.98□□□□□ -0.33
CDK3-201ENST00000425876 VSX1Q9NZR4 365 aaPredicted RBP12.98□□□□□ -0.33
CDK3-201ENST00000425876 CCDC59Q9P031 241 aaKnown RBP12.98□□□□□ -0.33
CDK3-201ENST00000425876 A0A1W2PNV4 684 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 A0A1W2PQL4 384 aaPredicted RBP12.97□□□□□ -0.33
CDK3-201ENST00000425876 A6NIZ1 184 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 SHISA8B8ZZ34 492 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 MS4A18H0YCH9 400 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 LALBAP00709 142 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 TFP02787 698 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 MRPL3P09001 348 aaKnown RBP12.97□□□□□ -0.33
CDK3-201ENST00000425876 ZNF17P17021 662 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 IL11P20809 199 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 GALP22466 123 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 AHCYP23526 432 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 DPP4P27487 766 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 ACVR1BP36896 505 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 CYB561P49447 251 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 CENPAP49450 140 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 TAS2R43P59537 309 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 RAP1BP61224 184 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 RPS3AP61247 264 aaKnown RBP12.97□□□□□ -0.33
CDK3-201ENST00000425876 ACTA2P62736 377 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 RAP1AP62834 184 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 ACTG2P63267 376 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 AIMP2Q13155 320 aaKnown RBP12.97□□□□□ -0.33
CDK3-201ENST00000425876 MYBPHQ13203 477 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 ZNF239Q16600 458 aaKnown RBP12.97□□□□□ -0.33
CDK3-201ENST00000425876 MS4A18Q3C1V0 323 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 FAM205BPQ63HN1 556 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 MDGA2Q7Z553 956 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 SLC35F2Q8IXU6 374 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 SYS1Q8N2H4 156 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 ZNRF4Q8WWF5 429 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 FER1L6-AS2Q96M78 137 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 SLIRPQ9GZT3 109 aaKnown RBP12.97□□□□□ -0.33
CDK3-201ENST00000425876 TRIM36Q9NQ86 728 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 IL17BQ9UHF5 180 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 TRAPPC4Q9Y296 219 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 MRPS18BQ9Y676 258 aaKnown RBP12.97□□□□□ -0.33
CDK3-201ENST00000425876 FKBP7Q9Y680 259 aa12.97□□□□□ -0.33
CDK3-201ENST00000425876 CPAMD8Q8IZJ3 1885 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 PRSS37A4D1T9 235 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 ZNF670-ZNF695F2Z2N8 137 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 H3BML4 177 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 ARHGEF9O43307 516 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 SERPINI2O75830 405 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 INHBBP09529 407 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 GAAP10253 952 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 CEACAM1P13688 526 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 FGF9P31371 208 aaPredicted RBP12.96□□□□□ -0.33
CDK3-201ENST00000425876 TGFBR1P36897 503 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 DAP3P51398 398 aaKnown RBP12.96□□□□□ -0.33
CDK3-201ENST00000425876 BLVRAP53004 296 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 TLE3Q04726 772 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 SOWAHCQ53LP3 525 aaPredicted RBP12.96□□□□□ -0.33
CDK3-201ENST00000425876 PXKQ7Z7A4 578 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 ZBTB46Q86UZ6 589 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 KLBQ86Z14 1044 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 BEST3Q8N1M1 668 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 OR51L1Q8NGJ5 315 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 OR6K6Q8NGW6 343 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 KIAA1143Q96AT1 154 aaPredicted RBP12.96□□□□□ -0.33
CDK3-201ENST00000425876 DNAJA3Q96EY1 480 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 MNTQ99583 582 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 TBX5Q99593 518 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 MARCH7Q9H992 704 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 ISG20L2Q9H9L3 353 aaKnown RBP12.96□□□□□ -0.33
CDK3-201ENST00000425876 STMN3Q9NZ72 180 aa12.96□□□□□ -0.33
CDK3-201ENST00000425876 TRDV1A0A1B0GX56 115 aa12.95□□□□□ -0.34
CDK3-201ENST00000425876 SEC14L5O43304 696 aa12.95□□□□□ -0.34
CDK3-201ENST00000425876 ZIC3O60481 467 aa12.95□□□□□ -0.34
CDK3-201ENST00000425876 HLA-DPB1P04440 258 aa12.95□□□□□ -0.34
CDK3-201ENST00000425876 PYCR1P32322 319 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms