RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ATXN7O15265 892 aaPredicted RBP11.97□□□□□ -0.49
PRPF39-202ENST00000424478 ARHGEF9O43307 516 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 TLX2O43763 284 aaPredicted RBP11.97□□□□□ -0.49
PRPF39-202ENST00000424478 SIRPAP78324 504 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 CDK5Q00535 292 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 C1DQ13901 141 aaKnown RBP11.97□□□□□ -0.49
PRPF39-202ENST00000424478 MESTQ5EB52 335 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 ZNF362Q5T0B9 420 aaPredicted RBP11.97□□□□□ -0.49
PRPF39-202ENST00000424478 WLSQ5T9L3 541 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 SMAP2Q8WU79 429 aaPredicted RBP11.97□□□□□ -0.49
PRPF39-202ENST00000424478 LIPHQ8WWY8 451 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 SARAFQ96BY9 339 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 C12orf49Q9H741 205 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 ZNF226Q9NYT6 803 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 NDRG4Q9ULP0 352 aaKnown RBP11.97□□□□□ -0.49
PRPF39-202ENST00000424478 RNF6Q9Y252 685 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 RTTNQ86VV8 2226 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 PRR14LQ5THK1 2151 aa11.97□□□□□ -0.49
PRPF39-202ENST00000424478 CPN1P15169 458 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 FMO3P31513 532 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 SLC6A6P31641 620 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 CDKN2AP42771 156 aaKnown RBP11.96□□□□□ -0.49
PRPF39-202ENST00000424478 SELENOPP49908 381 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 MAP2K6P52564 334 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 ESRRGP62508 458 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 RASGEF1BQ0VAM2 473 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 CRMP1Q14194 572 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 TAF11Q15544 211 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 INAQ16352 499 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 SLC35D2Q76EJ3 337 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.96□□□□□ -0.49
PRPF39-202ENST00000424478 ENTHD1Q8IYW4 607 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 C9orf106Q8NAJ2 232 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 PRDM14Q9GZV8 571 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 NRIP3Q9NQ35 241 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 B3GALT5Q9Y2C3 310 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 CORINQ9Y5Q5 1042 aa11.96□□□□□ -0.49
PRPF39-202ENST00000424478 SLC22A20A6NK97 555 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 DCTN6O00399 190 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 TRAF3IP2O43734 574 aaPredicted RBP11.96□□□□□ -0.5
PRPF39-202ENST00000424478 SLC19A2O60779 497 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 STSP08842 583 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF43P17038 809 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 CDH2P19022 906 aaPredicted RBP11.96□□□□□ -0.5
PRPF39-202ENST00000424478 ACVR1BP36896 505 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 CLK1P49759 484 aaKnown RBP11.96□□□□□ -0.5
PRPF39-202ENST00000424478 FOXF2Q12947 444 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 ETFDHQ16134 617 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 RTL6Q6ICC9 239 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 C5orf46Q6UWT4 87 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 FAM122BQ7Z309 247 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 UEVLDQ8IX04 471 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 OR9K2Q8NGE7 335 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 SGCDQ92629 289 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 INTS12Q96CB8 462 aaKnown RBP11.96□□□□□ -0.5
PRPF39-202ENST00000424478 HRASLS5Q96KN8 279 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 GRHPRQ9UBQ7 328 aa11.96□□□□□ -0.5
PRPF39-202ENST00000424478 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF716A6NP11 495 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SYNGR4O95473 234 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 CD14P08571 375 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 GGT2P36268 569 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 RPS3AP61247 264 aaKnown RBP11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SLC17A1Q14916 467 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 PLBD1Q6P4A8 553 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SEM1Q6ZVN7 128 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 ZIC4Q8N9L1 334 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 CPNE4Q96A23 557 aaPredicted RBP11.95□□□□□ -0.5
PRPF39-202ENST00000424478 IMPAD1Q9NX62 359 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 FAM215AQ9Y5M1 114 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 IGKV1D-43A0A0B4J1Z2 117 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SMSP52788 366 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 PRPS1P60891 318 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 CD47Q08722 323 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 C9orf135Q5VTT2 229 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SLX4IPQ5VYV7 408 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 LEG1Q6P5S2 330 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 P4HA3Q7Z4N8 544 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 PM20D2Q8IYS1 436 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SYT4Q9H2B2 425 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SPTBN1Q01082 2364 aaKnown RBP11.95□□□□□ -0.5
PRPF39-202ENST00000424478 OR6C68A6NDL8 312 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 LINC01387J3KSC0 135 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SURF4O15260 269 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SEC14L2O76054 403 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 TSPAN19P0C672 248 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 ACSF3Q4G176 576 aaPredicted RBP11.95□□□□□ -0.5
PRPF39-202ENST00000424478 PHYHD1Q5SRE7 291 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 ZNF691Q5VV52 312 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 CASP12Q6UXS9 341 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 CREB3L2Q70SY1 520 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 DOLPP1Q86YN1 238 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 CPOQ8IVL8 374 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SCAIQ8N9R8 606 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 NAXEQ8NCW5 288 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 APH1BQ8WW43 257 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 HDAC2Q92769 488 aaKnown RBP11.95□□□□□ -0.5
PRPF39-202ENST00000424478 ZHX1-C8orf76Q96EF9 292 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 OR51V1Q9H2C8 321 aa11.95□□□□□ -0.5
PRPF39-202ENST00000424478 SRA1Q9HD15 236 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms