RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RAD51DO75771 328 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 F13BP05160 661 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 GPR4P46093 362 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 BIDP55957 195 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 RPL18Q07020 188 aaKnown RBP13.9□□□□□ -0.18
BRAT1-202ENST00000421712 LGALS3BPQ08380 585 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 LAPTM4AQ15012 233 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 IQCCQ4KMZ1 466 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 HMBOX1Q6NT76 420 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 SLC35D2Q76EJ3 337 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 OAFQ86UD1 273 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 AQP12AQ8IXF9 295 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 ZNF433Q8N7K0 673 aaPredicted RBP13.9□□□□□ -0.18
BRAT1-202ENST00000421712 OR51A7Q8NH64 312 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 C14orf79Q96F83 325 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 ALPK1Q96QP1 1244 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 INIPQ9NRY2 104 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 TAS2R16Q9NYV7 291 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 TMEM5Q9Y2B1 443 aa13.9□□□□□ -0.18
BRAT1-202ENST00000421712 DHRS12A0PJE2 317 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 MCIDASD6RGH6 385 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 UPK3AO75631 287 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 KRT36O76013 467 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 BCL10O95999 233 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 RAP2AP10114 183 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 PRF1P14222 555 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 MPGP29372 298 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 ERFP50548 548 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 TGFBR3Q03167 851 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 CAMK2DQ13557 499 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 PIWIL3Q7Z3Z3 882 aaKnown RBP13.89□□□□□ -0.19
BRAT1-202ENST00000421712 WFDC8Q8IUA0 241 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 OR4K5Q8NGD3 323 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 OR13C2Q8NGS9 318 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 OR6N1Q8NGY5 312 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 MOSPD2Q8NHP6 518 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 LIPHQ8WWY8 451 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 MUCL1Q96DR8 90 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 FAM46AQ96IP4 442 aaKnown RBP13.89□□□□□ -0.19
BRAT1-202ENST00000421712 DHRS1Q96LJ7 313 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 ALKBH3Q96Q83 286 aaPredicted RBP13.89□□□□□ -0.19
BRAT1-202ENST00000421712 OR2M2Q96R28 347 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 USB1Q9BQ65 265 aaKnown RBP13.89□□□□□ -0.19
BRAT1-202ENST00000421712 OR10A4Q9H209 315 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 LRMDAQ9H2I8 198 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 MMADHCQ9H3L0 296 aaPredicted RBP13.89□□□□□ -0.19
BRAT1-202ENST00000421712 MALT1Q9UDY8 824 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 SLC7A8Q9UHI5 535 aa13.89□□□□□ -0.19
BRAT1-202ENST00000421712 TRAV27A0A087WT01 109 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 SH3PXD2BA1X283 911 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 A6NNC1 897 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 M0R3G1 203 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 TNFRSF11BO00300 401 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 CLOCKO15516 846 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 OR10H3O60404 316 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 ZNF432O94892 652 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 COX5AP20674 150 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 IFNGR2P38484 337 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 SLC9A3P48764 834 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 FOXG1P55316 489 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-202ENST00000421712 ROR2Q01974 943 aaKnown RBP13.88□□□□□ -0.19
BRAT1-202ENST00000421712 MELKQ14680 651 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 DAZAP2Q15038 168 aaPredicted RBP13.88□□□□□ -0.19
BRAT1-202ENST00000421712 SEC23BQ15437 767 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 TAF11Q15544 211 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 ALG10Q5BKT4 473 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 TMPRSS11FQ6ZWK6 438 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 CANT1Q8WVQ1 401 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 HSD17B8Q92506 261 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 RSRC1Q96IZ7 334 aaKnown RBP13.88□□□□□ -0.19
BRAT1-202ENST00000421712 TNFRSF13CQ96RJ3 184 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 CHID1Q9BWS9 393 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 LINC00470Q9BZP3 86 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 NDEL1Q9GZM8 345 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 B3GAT2Q9NPZ5 323 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 CRYBG3Q68DQ2 2970 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 ALPK2Q86TB3 2170 aa13.88□□□□□ -0.19
BRAT1-202ENST00000421712 GNGT2O14610 69 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 CIB2O75838 187 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 ITGA5P08648 1049 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 HOXC12P31275 282 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 RPL4P36578 427 aaKnown RBP13.87□□□□□ -0.19
BRAT1-202ENST00000421712 DAP3P51398 398 aaKnown RBP13.87□□□□□ -0.19
BRAT1-202ENST00000421712 CTXN1P60606 82 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 TOP3AQ13472 1001 aaPredicted RBP13.87□□□□□ -0.19
BRAT1-202ENST00000421712 C1orf146Q5VVC0 180 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 OR7E24Q6IFN5 339 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 C22orf34Q6ZV56 151 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 ADGRG5Q8IZF4 528 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 ZNF566Q969W8 418 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 ADAD1Q96M93 576 aaKnown RBP13.87□□□□□ -0.19
BRAT1-202ENST00000421712 REEP1Q9H902 201 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 HIF3AQ9Y2N7 669 aa13.87□□□□□ -0.19
BRAT1-202ENST00000421712 CDC42EP2O14613 210 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 CST1P01037 141 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 THBDP07204 575 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 CRYGSP22914 178 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 MAGEA2P43356 314 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 OMPP47874 163 aa13.86□□□□□ -0.19
BRAT1-202ENST00000421712 CSNK1A1P48729 337 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms