RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 ANKDD1AQ495B1 522 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 SLC35F1Q5T1Q4 408 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 SLC35D2Q76EJ3 337 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 FAM122BQ7Z309 247 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 PXKQ7Z7A4 578 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 MCEMP1Q8IX19 187 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 SLC43A2Q8N370 569 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 PACRGLQ8N7B6 248 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 GALNT11Q8NCW6 608 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 ANKK1Q8NFD2 765 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 DNAJC9Q8WXX5 260 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 PHF3Q92576 2039 aaKnown RBP11.39□□□□□ -0.59
ATG4B-208ENST00000419606 RASD2Q96D21 266 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 ZNF570Q96NI8 536 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 ERMAPQ96PL5 475 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-208ENST00000419606 DMRTA2Q96SC8 542 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 GPX7Q96SL4 187 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-208ENST00000419606 SF3B5Q9BWJ5 86 aaKnown RBP11.39□□□□□ -0.59
ATG4B-208ENST00000419606 GABARAPL3Q9BY60 117 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 NRIP3Q9NQ35 241 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 NOX1Q9Y5S8 564 aa11.39□□□□□ -0.59
ATG4B-208ENST00000419606 SLC35F4A4IF30 521 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 ZAR1LA6NP61 321 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 E9PQ18 207 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 SS18L1O75177 396 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-208ENST00000419606 VAMP5O95183 116 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 YES1P07947 543 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 CD14P08571 375 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 HOXD4P09016 255 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-208ENST00000419606 ZNF43P17038 809 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 AGTR1P30556 359 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 KIR2DL2P43627 348 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-208ENST00000419606 GIPRP48546 466 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 SELENOPP49908 381 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 RAD23AP54725 363 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 BIDP55957 195 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 CDK5Q00535 292 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 PDK3Q15120 406 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 RNPS1Q15287 305 aaKnown RBP11.38□□□□□ -0.59
ATG4B-208ENST00000419606 SF3B4Q15427 424 aaKnown RBP eCLIP11.38□□□□□ -0.596e-9■■■□□ 18.7
ATG4B-208ENST00000419606 GUSBP1Q15486 140 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 SNCBQ16143 134 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 PGGHGQ32M88 737 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 ARMC4Q5T2S8 1044 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 CARD17Q5XLA6 110 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 VWA1Q6PCB0 445 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 DPY19L2P2Q6ZN68 376 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 FJX1Q86VR8 437 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 OR52L1Q8NGH7 329 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 ZNF519Q8TB69 540 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 TEX47Q8TBZ9 253 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 ASB10Q8WXI3 467 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 POLDIP3Q9BY77 421 aaKnown RBP11.38□□□□□ -0.59
ATG4B-208ENST00000419606 GRIP2Q9C0E4 1043 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 TXNIPQ9H3M7 391 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 BCO1Q9HAY6 547 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 FAM118AQ9NWS6 357 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 SMPD3Q9NY59 655 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-208ENST00000419606 KLHL9Q9P2J3 617 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 MEMO1Q9Y316 297 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 ORC6Q9Y5N6 252 aa11.38□□□□□ -0.59
ATG4B-208ENST00000419606 A0A0G2JNJ9 132 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 TEX13CA0A0J9YWL9 993 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 A0A1W2PRG6 482 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 ZNF724A8MTY0 619 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 E9PLN8 166 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 H7C1C5 153 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 CCL21O00585 134 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 BCL10O95999 233 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 IGHMP01871 453 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 TMIGD3P0DMS9 266 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-208ENST00000419606 FCGR2AP12318 317 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 HIST1H1CP16403 213 aaKnown RBP11.37□□□□□ -0.59
ATG4B-208ENST00000419606 CEACAM8P31997 349 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-208ENST00000419606 TIMP3P35625 211 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 ACVR1BP36896 505 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 VHLP40337 213 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 PER3P56645 1201 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 RPL27P61353 136 aaKnown RBP11.37□□□□□ -0.59
ATG4B-208ENST00000419606 LCN6P62502 163 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 ESRRGP62508 458 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 CAMK2DQ13557 499 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 MESTQ5EB52 335 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 PHYHD1Q5SRE7 291 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 ZNF362Q5T0B9 420 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-208ENST00000419606 SLX4IPQ5VYV7 408 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 NIPAL3Q6P499 406 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 IZUMO2Q6UXV1 221 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 PTCHD4Q6ZW05 846 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 CCDC71Q8IV32 467 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-208ENST00000419606 CNEP1R1Q8N9A8 125 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 OR2T33Q8NG76 320 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 HDAC2Q92769 488 aaKnown RBP11.37□□□□□ -0.59
ATG4B-208ENST00000419606 UBE2FQ969M7 185 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 GMPPAQ96IJ6 420 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-208ENST00000419606 OR2M2Q96R28 347 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 TM9SF2Q99805 663 aa11.37□□□□□ -0.59
ATG4B-208ENST00000419606 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms