RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CPLX4Q7Z7G2 160 aa18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 LIPHQ8WWY8 451 aa18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 LRR1Q96L50 414 aa18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 C1QTNF6Q9BXI9 259 aa18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 NSRP1Q9H0G5 558 aaKnown RBP18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 CRNNQ9UBG3 495 aaPredicted RBP18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 NOX1Q9Y5S8 564 aa18.01■□□□□ 0.47
PKNOX1-202ENST00000418336 SLC35F4A4IF30 521 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 E7EQL1 145 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 DYNC1I1O14576 645 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 SMPD2O60906 423 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 SLC43A1O75387 559 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 MT-ND1P03886 318 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 THRBP10828 461 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 NQO1P15559 274 aaKnown RBP18■□□□□ 0.47
PKNOX1-202ENST00000418336 PTH2RP49190 550 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 NKX6-1P78426 367 aaPredicted RBP18■□□□□ 0.47
PKNOX1-202ENST00000418336 C1DQ13901 141 aaKnown RBP18■□□□□ 0.47
PKNOX1-202ENST00000418336 TMEM108Q6UXF1 575 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 ABHD12BQ7Z5M8 362 aaPredicted RBP18■□□□□ 0.47
PKNOX1-202ENST00000418336 DTX2Q86UW9 622 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 RBM15BQ8NDT2 890 aaKnown RBP18■□□□□ 0.47
PKNOX1-202ENST00000418336 FBXW5Q969U6 566 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 TPD52L3Q96J77 140 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 PRRC1Q96M27 445 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 ARL8BQ9NVJ2 186 aa18■□□□□ 0.47
PKNOX1-202ENST00000418336 MAGED1Q9Y5V3 778 aaPredicted RBP18■□□□□ 0.47
PKNOX1-202ENST00000418336 J3KTA2 159 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 TMCC2O75069 709 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 NCK1P16333 377 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 CDH2P19022 906 aaPredicted RBP17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 PTAFRP25105 342 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 TAS2R41P59536 307 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 ARF1P84077 181 aaKnown RBP17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 FHL1Q13642 323 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 C11orf71Q6IPW1 123 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 ANKRD16Q6P6B7 361 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 ZNF627Q7L945 461 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 ANKS4BQ8N8V4 417 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 PIK3C3Q8NEB9 887 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 SMAP2Q8WU79 429 aaPredicted RBP17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 TMEM239Q8WW34 195 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 TRAF4Q9BUZ4 470 aaPredicted RBP17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 SEC61A2Q9H9S3 476 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 CRLF2Q9HC73 371 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 OBP2BQ9NPH6 170 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 ARL2BPQ9Y2Y0 163 aa17.99■□□□□ 0.47
PKNOX1-202ENST00000418336 IGHV1-18A0A0C4DH31 117 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 M0R1B8 84 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 PIP5K1CO60331 668 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 OR7A10O76100 309 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 SERPINA1P01009 418 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 IGLV1-44P01699 117 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 ADORA3P0DMS8 318 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 CD99P14209 185 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 PRPS1P60891 318 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 CEACAM16Q2WEN9 425 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 IQCCQ4KMZ1 466 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 Q5PR19 223 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 SHEQ5VZ18 495 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 PRSS57Q6UWY2 283 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 MYPOPQ86VE0 399 aaPredicted RBP17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 OFCC1Q8IZS5 231 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 C10orf53Q8N6V4 93 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 TMEM54Q969K7 222 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 HSH2DQ96JZ2 352 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 GRIP2Q9C0E4 1043 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 SPAG4Q9NPE6 437 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 NANSQ9NR45 359 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 CISD1Q9NZ45 108 aaKnown RBP17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 ZNF224Q9NZL3 707 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 CD300AQ9UGN4 299 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 LAMP3Q9UQV4 416 aa17.98■□□□□ 0.47
PKNOX1-202ENST00000418336 A0A096LPE4 126 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 A0A1W2PPZ6 126 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 C11orf98E9PRG8 122 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 IGKV3-15P01624 115 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 IFNGR1P15260 489 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 FUT1P19526 365 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 CDH11P55287 796 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 SH3BGRP55822 239 aaPredicted RBP17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 TUBA1BP68363 451 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 TUBA4AP68366 448 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 CAMK2DQ13557 499 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 KLHL17Q6TDP4 642 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 TUBA1AQ71U36 451 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 FAM86B1Q8N7N1 296 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 OR6X1Q8NH79 312 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 PERPQ96FX8 193 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 RADILQ96JH8 1075 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 ZNF75AQ96N20 296 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 SEPHS2Q99611 448 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 KCTD14Q9BQ13 255 aaPredicted RBP17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 MGAT4BQ9UQ53 548 aa17.97■□□□□ 0.47
PKNOX1-202ENST00000418336 ZNF99A8MXY4 864 aaPredicted RBP17.96■□□□□ 0.47
PKNOX1-202ENST00000418336 M0R3G1 203 aa17.96■□□□□ 0.47
PKNOX1-202ENST00000418336 KRT33AO76009 404 aa17.96■□□□□ 0.47
PKNOX1-202ENST00000418336 HOXB1P14653 301 aaPredicted RBP17.96■□□□□ 0.47
PKNOX1-202ENST00000418336 AHCYP23526 432 aa17.96■□□□□ 0.47
PKNOX1-202ENST00000418336 YAP1P46937 504 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms