RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 TRAV1-2A0A0B4J238 106 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 KDM4BO94953 1096 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 PSMB1P20618 241 aaKnown RBP10.84□□□□□ -0.67
LIMK1-202ENST00000418310 GFERP55789 205 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 TCTE1Q5JU00 501 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 OR5M10Q6IEU7 315 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 KDM8Q8N371 416 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 POMGNT2Q8NAT1 580 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 OR51D1Q8NGF3 324 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 OR5AK2Q8NH90 309 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 TSEN15Q8WW01 171 aaKnown RBP10.84□□□□□ -0.67
LIMK1-202ENST00000418310 TMEM106AQ96A25 262 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 AMELYQ99218 206 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 GABRG3Q99928 467 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 ZNF426Q9BUY5 554 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 ZNF436Q9C0F3 470 aaPredicted RBP10.84□□□□□ -0.67
LIMK1-202ENST00000418310 KLHL9Q9P2J3 617 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 SERTAD3Q9UJW9 196 aa10.84□□□□□ -0.67
LIMK1-202ENST00000418310 IGKV1D-42A0A075B6H8 117 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 OR5K3A6NET4 321 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 M0R233 179 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 SDC3O75056 442 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 OR7A10O76100 309 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 GAAP10253 952 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 TNFRSF4P43489 277 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 NKAIN2Q5VXU1 208 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 STAC2Q6ZMT1 411 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 Q6ZS52 159 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 SHISA6Q6ZSJ9 500 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 OR4D10Q8NGI6 311 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 ZDHHC1Q8WTX9 485 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 ELSPBP1Q96BH3 223 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 S100A16Q96FQ6 103 aaKnown RBP10.83□□□□□ -0.67
LIMK1-202ENST00000418310 OR1F2PQ96R84 312 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 HAO2Q9NYQ3 351 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 FRRS1LQ9P0K9 344 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 MRM2Q9UI43 246 aaKnown RBP10.83□□□□□ -0.67
LIMK1-202ENST00000418310 PCDHGA5Q9Y5G8 931 aa10.83□□□□□ -0.67
LIMK1-202ENST00000418310 C17orf105B2RV13 164 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 CHURC1-FNTBB4DL54 471 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 FOXS1O43638 330 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 ITGA10O75578 1167 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 CSN2P05814 226 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 POU3F2P20265 443 aaPredicted RBP10.83□□□□□ -0.68
LIMK1-202ENST00000418310 EFNB2P52799 333 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 HSF2Q03933 536 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 HYAL1Q12794 435 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 TOMM34Q15785 309 aaPredicted RBP10.83□□□□□ -0.68
LIMK1-202ENST00000418310 SMUG1Q53HV7 270 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 SFRP5Q5T4F7 317 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 SLC22A10Q63ZE4 541 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 DPY19L2P2Q6ZN68 376 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 SLITRK4Q8IW52 837 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 PM20D2Q8IYS1 436 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 C19orf47Q8N9M1 422 aaKnown RBP10.83□□□□□ -0.68
LIMK1-202ENST00000418310 TSLPQ969D9 159 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 GPR137Q96N19 417 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 HEXA-AS1Q9H8Q6 139 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 GRHPRQ9UBQ7 328 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 ELF5Q9UKW6 265 aaPredicted RBP10.83□□□□□ -0.68
LIMK1-202ENST00000418310 PCOLCE2Q9UKZ9 415 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 ZNF337Q9Y3M9 751 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 LOC100509620A0A075B734 347 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 AIPO00170 330 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 AKR7A3O95154 331 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 TPOP07202 933 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 LIPCP11150 499 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 GABRG2P18507 467 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 CCKBRP32239 447 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 P2RX1P51575 399 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 PSMA6P60900 246 aaKnown RBP10.83□□□□□ -0.68
LIMK1-202ENST00000418310 LTBQ06643 244 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 MEP1BQ16820 701 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 PCGF3Q3KNV8 242 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 ZCCHC12Q6PEW1 402 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 FAM198BQ6UWH4 519 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 MDGA2Q7Z553 956 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 CDH24Q86UP0 819 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 HAVCR2Q8TDQ0 301 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 RTN4RQ9BZR6 473 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 NXF5Q9H1B4 397 aaKnown RBP10.83□□□□□ -0.68
LIMK1-202ENST00000418310 TMEM138Q9NPI0 162 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 DHCR7Q9UBM7 475 aaKnown RBP10.83□□□□□ -0.68
LIMK1-202ENST00000418310 KCNG2Q9UJ96 466 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 SLC22A13Q9Y226 551 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 SPEF1Q9Y4P9 236 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 WDFY3Q8IZQ1 3526 aa10.83□□□□□ -0.68
LIMK1-202ENST00000418310 MEIKINA0A087WXM9 373 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 A0A1B0GVI7 797 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 CLDN4O14493 209 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 ARPC5O15511 151 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 HCRTR2O43614 444 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 PRAMEF2O60811 474 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 GLCEO94923 617 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 SULT1A3P0DMM9 295 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 SULT1A4P0DMN0 295 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 DPP4P27487 766 aa10.82□□□□□ -0.68
LIMK1-202ENST00000418310 EIF2B5Q13144 721 aaKnown RBP10.82□□□□□ -0.68
LIMK1-202ENST00000418310 SMAD2Q15796 467 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms