RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 P2RY6Q15077 328 aa11□□□□□ -0.65
SKA1-203ENST00000417656 CARD17Q5XLA6 110 aa11□□□□□ -0.65
SKA1-203ENST00000417656 NHLRC1Q6VVB1 395 aa11□□□□□ -0.65
SKA1-203ENST00000417656 C22orf34Q6ZV56 151 aa11□□□□□ -0.65
SKA1-203ENST00000417656 RRM2BQ7LG56 351 aa11□□□□□ -0.65
SKA1-203ENST00000417656 BHLHA15Q7RTS1 189 aaPredicted RBP11□□□□□ -0.65
SKA1-203ENST00000417656 PIWIL3Q7Z3Z3 882 aaKnown RBP11□□□□□ -0.65
SKA1-203ENST00000417656 PXKQ7Z7A4 578 aa11□□□□□ -0.65
SKA1-203ENST00000417656 SPATA24Q86W54 205 aa11□□□□□ -0.65
SKA1-203ENST00000417656 AQP12AQ8IXF9 295 aa11□□□□□ -0.65
SKA1-203ENST00000417656 RNF113BQ8IZP6 322 aaKnown RBP11□□□□□ -0.65
SKA1-203ENST00000417656 TMEM123Q8N131 208 aa11□□□□□ -0.65
SKA1-203ENST00000417656 POMGNT2Q8NAT1 580 aa11□□□□□ -0.65
SKA1-203ENST00000417656 ANKK1Q8NFD2 765 aa11□□□□□ -0.65
SKA1-203ENST00000417656 STEAP2Q8NFT2 490 aa11□□□□□ -0.65
SKA1-203ENST00000417656 OR4K5Q8NGD3 323 aa11□□□□□ -0.65
SKA1-203ENST00000417656 LIPHQ8WWY8 451 aa11□□□□□ -0.65
SKA1-203ENST00000417656 C14orf79Q96F83 325 aa11□□□□□ -0.65
SKA1-203ENST00000417656 TXNDC15Q96J42 360 aa11□□□□□ -0.65
SKA1-203ENST00000417656 WFIKKN1Q96NZ8 548 aa11□□□□□ -0.65
SKA1-203ENST00000417656 ZNF347Q96SE7 839 aa11□□□□□ -0.65
SKA1-203ENST00000417656 EMC6Q9BV81 110 aa11□□□□□ -0.65
SKA1-203ENST00000417656 ASB6Q9NWX5 421 aa11□□□□□ -0.65
SKA1-203ENST00000417656 NDRG3Q9UGV2 375 aa11□□□□□ -0.65
SKA1-203ENST00000417656 AURKCQ9UQB9 309 aa11□□□□□ -0.65
SKA1-203ENST00000417656 TMEM5Q9Y2B1 443 aa11□□□□□ -0.65
SKA1-203ENST00000417656 GPR52Q9Y2T5 361 aa11□□□□□ -0.65
SKA1-203ENST00000417656 SH3PXD2BA1X283 911 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 HTR3EA5X5Y0 456 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 PDLIM1O00151 329 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 EBAG9O00559 213 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 CDC42EP2O14613 210 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 CLOCKO15516 846 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 SLC43A1O75387 559 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 KRT33AO76009 404 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 F13BP05160 661 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 THBDP07204 575 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 RAP2AP10114 183 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 EPXP11678 715 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 OMPP47874 163 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 LIMS1P48059 325 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 BIDP55957 195 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 SMIM11AP58511 58 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 RPS4XP62701 263 aaKnown RBP10.99□□□□□ -0.65
SKA1-203ENST00000417656 TLE4Q04727 773 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 STK11Q15831 433 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 SLC35D2Q76EJ3 337 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 LINGO2Q7L985 606 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 ZNF433Q8N7K0 673 aaPredicted RBP10.99□□□□□ -0.65
SKA1-203ENST00000417656 CANT1Q8WVQ1 401 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 DACH2Q96NX9 599 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 LINC00470Q9BZP3 86 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 INIPQ9NRY2 104 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 VNN3Q9NY84 501 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 TAS2R16Q9NYV7 291 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.99□□□□□ -0.65
SKA1-203ENST00000417656 HIF3AQ9Y2N7 669 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 LYVE1Q9Y5Y7 322 aa10.99□□□□□ -0.65
SKA1-203ENST00000417656 FBN2P35556 2912 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 TCRBV3S1A0A5B6 114 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 CIB4A0PJX0 185 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 SLC35F4A4IF30 521 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 A6NNC1 897 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 ZNF587BE7ETH6 402 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 TSPAN19P0C672 248 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 PPP3CBP16298 524 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 SSTR2P30874 369 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 TOP3AQ13472 1001 aaPredicted RBP10.98□□□□□ -0.65
SKA1-203ENST00000417656 CAMK2DQ13557 499 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 FHL1Q13642 323 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 ALG10Q5BKT4 473 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 PHYHD1Q5SRE7 291 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 ALKBH2Q6NS38 261 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 TMPRSS11FQ6ZWK6 438 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 ASRGL1Q7L266 308 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 OAFQ86UD1 273 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 IGFN1Q86VF2 1251 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 TMEM200AQ86VY9 491 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 WFDC8Q8IUA0 241 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 CDK20Q8IZL9 346 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 GPR137CQ8N3F9 429 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 OR51A7Q8NH64 312 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 POP5Q969H6 163 aaKnown RBP10.98□□□□□ -0.65
SKA1-203ENST00000417656 RSRC1Q96IZ7 334 aaKnown RBP10.98□□□□□ -0.65
SKA1-203ENST00000417656 ALPK1Q96QP1 1244 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 HDHD5Q9BXW7 423 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 OR10A4Q9H209 315 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 MCCC2Q9HCC0 563 aa10.98□□□□□ -0.65
SKA1-203ENST00000417656 KRCC1Q9NPI7 259 aaPredicted RBP10.98□□□□□ -0.65
SKA1-203ENST00000417656 CELSR2Q9HCU4 2923 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 A0A1W2PRG6 482 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 OR6C65A6NJZ3 312 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 ZNF726A6NNF4 738 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 MCIDASD6RGH6 385 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 M0R3G1 203 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 TNFRSF11BO00300 401 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 SIAH2O43255 324 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 OR10H3O60404 316 aa10.97□□□□□ -0.65
SKA1-203ENST00000417656 CDH2P19022 906 aaPredicted RBP10.97□□□□□ -0.65
SKA1-203ENST00000417656 CRYGSP22914 178 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms