RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 LYZL6O75951 148 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 ZNF432O94892 652 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 GOSR1O95249 250 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 MAKP20794 623 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 DNAJA1P31689 397 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 CCKARP32238 428 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 IFNGR2P38484 337 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 LSM11P83369 360 aaKnown RBP eCLIP20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 RPL18Q07020 188 aaKnown RBP20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 TAF11Q15544 211 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 OR7E24Q6IFN5 339 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 TMPRSS11FQ6ZWK6 438 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 SLC35D2Q76EJ3 337 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 SSX8Q7RTT4 187 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 OAFQ86UD1 273 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 SPATA24Q86W54 205 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 ZNF433Q8N7K0 673 aaPredicted RBP20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 OR4K5Q8NGD3 323 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 HSD17B8Q92506 261 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 ALPK1Q96QP1 1244 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 INIPQ9NRY2 104 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 SLC7A8Q9UHI5 535 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 AURKCQ9UQB9 309 aa20.37■□□□□ 0.85
SMARCB1-205ENST00000417137 DHRS12A0PJE2 317 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 SLC35F4A4IF30 521 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 ZNF587BE7ETH6 402 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 BCL10O95999 233 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 IFNGR1P15260 489 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 MPGP29372 298 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 AQP2P41181 271 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 TLE4Q04727 773 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 NHLRC1Q6VVB1 395 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 P2RY8Q86VZ1 359 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 GPR137CQ8N3F9 429 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 S100PBPQ96BU1 408 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 TXNDC15Q96J42 360 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 LRR1Q96L50 414 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 OR2M2Q96R28 347 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 NDEL1Q9GZM8 345 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 MED29Q9NX70 200 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 HIF3AQ9Y2N7 669 aa20.36■□□□□ 0.85
SMARCB1-205ENST00000417137 SH3PXD2BA1X283 911 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 TSPAN19P0C672 248 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 HMGA2P52926 109 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 PRPS1P60891 318 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 LAPTM4AQ15012 233 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 TSC22D1Q15714 1073 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 HMBOX1Q6NT76 420 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 HDDC2Q7Z4H3 204 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 LINC00471Q8N535 108 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 OR6X1Q8NH79 312 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 MUCL1Q96DR8 90 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 ZC3HAV1LQ96H79 300 aaKnown RBP20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 FUZQ9BT04 418 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 EMC6Q9BV81 110 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 CHID1Q9BWS9 393 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 YY1AP1Q9H869 796 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 B3GAT2Q9NPZ5 323 aa20.35■□□□□ 0.85
SMARCB1-205ENST00000417137 A6NNC1 897 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 PDLIM1O00151 329 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 TNFRSF11BO00300 401 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 UPK3AO75631 287 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 F13BP05160 661 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 GPR4P46093 362 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 DAP3P51398 398 aaKnown RBP20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 BIDP55957 195 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 SEC23BQ15437 767 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 ZBED5Q49AG3 693 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 ALG10Q5BKT4 473 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 ADGRG5Q8IZF4 528 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 TMEM123Q8N131 208 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 C1orf162Q8NEQ5 155 aaPredicted RBP20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 OR6N1Q8NGY5 312 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 OR51A7Q8NH64 312 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 CANT1Q8WVQ1 401 aa20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 FAM46AQ96IP4 442 aaKnown RBP20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 STX18Q9P2W9 335 aaKnown RBP20.34■□□□□ 0.85
SMARCB1-205ENST00000417137 MCIDASD6RGH6 385 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 CLOCKO15516 846 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 OR10H3O60404 316 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 RAD51DO75771 328 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 ITGA5P08648 1049 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 CRYGSP22914 178 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 OMPP47874 163 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 TIMM23BQ5SRD1 257 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 C1QTNF12Q5T7M4 302 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 CARD17Q5XLA6 110 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 FBXW10Q5XX13 1052 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 OR2T5Q6IEZ7 315 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 C20orf196Q8IYI0 205 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 OR2T29Q8NH02 315 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 MOSPD2Q8NHP6 518 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 MUS81Q96NY9 551 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 TNFRSF13CQ96RJ3 184 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 REEP1Q9H902 201 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 NGBQ9NPG2 151 aa20.33■□□□□ 0.85
SMARCB1-205ENST00000417137 PKDREJQ9NTG1 2253 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 CREBBPQ92793 2442 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 TCRBV3S1A0A5B6 114 aa20.32■□□□□ 0.84
SMARCB1-205ENST00000417137 NPIPB13A6NJU9 1138 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms