RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DAG1Q14118 895 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 SQLEQ14534 574 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 ADRM1Q16186 407 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 CR1LQ2VPA4 569 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 LRIF1Q5T3J3 769 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 KRT80Q6KB66 452 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 REEP3Q6NUK4 255 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 EPGNQ6UW88 154 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 COMTD1Q86VU5 262 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 CDK20Q8IZL9 346 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 CKAP2Q8WWK9 683 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 EPYCQ99645 322 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 SOX7Q9BT81 388 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 ASPNQ9BXN1 380 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 RSPO3Q9BXY4 272 aaPredicted RBP12.48□□□□□ -0.41
PAF1-202ENST00000416728 NOX3Q9HBY0 568 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 B3GAT2Q9NPZ5 323 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 TCF7L2Q9NQB0 619 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
PAF1-202ENST00000416728 SLC13A4Q9UKG4 626 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 CMAHPQ9Y471 501 aa12.48□□□□□ -0.41
PAF1-202ENST00000416728 YLPM1P49750 1951 aaKnown RBP12.48□□□□□ -0.41
PAF1-202ENST00000416728 A0A087WUJ7 227 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 TMEM129A0AVI4 362 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 PRORSD1PA6NEY8 169 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 POLR3GO15318 223 aaPredicted RBP12.47□□□□□ -0.41
PAF1-202ENST00000416728 TPST1O60507 370 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 HPRP00739 348 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 HLA-HP01893 362 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 TACSTD2P09758 323 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 APEX1P27695 318 aaKnown RBP12.47□□□□□ -0.41
PAF1-202ENST00000416728 MRPL19P49406 292 aaKnown RBP12.47□□□□□ -0.41
PAF1-202ENST00000416728 SRSF2Q01130 221 aaKnown RBP12.47□□□□□ -0.41
PAF1-202ENST00000416728 POU3F1Q03052 451 aaPredicted RBP12.47□□□□□ -0.41
PAF1-202ENST00000416728 GSG1Q2KHT4 349 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 GLIPR1L2Q4G1C9 344 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 BLOC1S3Q6QNY0 202 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 MSRB3Q8IXL7 192 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 C10orf111Q8N326 155 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 ZNF786Q8N393 782 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 SCAIQ8N9R8 606 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 OR6S1Q8NH40 331 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 HPS1Q92902 700 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 TLCD1Q96CP7 247 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 SPDL1Q96EA4 605 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 SLC41A3Q96GZ6 507 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 LRR1Q96L50 414 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 EMC6Q9BV81 110 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 TMEM27Q9HBJ8 222 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 SLAMF8Q9P0V8 285 aa12.47□□□□□ -0.41
PAF1-202ENST00000416728 MS4A18H0YCH9 400 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 LILRA1O75019 489 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 ADRA2AP08913 450 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 CD79AP11912 226 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 HLA-DOBP13765 273 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 IFNGR1P15260 489 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 NR4A1P22736 598 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 SLC6A2P23975 617 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 PUDPQ08623 228 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 PMS2P3Q13401 168 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 SCARB2Q14108 478 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 OR1Q1Q15612 314 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 MS4A18Q3C1V0 323 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 LIPNQ5VXI9 398 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 ZNF813Q6ZN06 617 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 SNX32Q86XE0 403 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 FUNDC1Q8IVP5 155 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 C10orf53Q8N6V4 93 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 OR6N1Q8NGY5 312 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 UBASH3BQ8TF42 649 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 MS4A3Q96HJ5 214 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 C7orf26Q96N11 449 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 SNX18Q96RF0 628 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 ZNF607Q96SK3 696 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 TPK1Q9H3S4 243 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 TMBIM4Q9HC24 238 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 MED29Q9NX70 200 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 B3GNT2Q9NY97 397 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 CCDC167Q9P0B6 97 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 VAPAQ9P0L0 249 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 CORO2BQ9UQ03 480 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 POFUT2Q9Y2G5 429 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 SPEF1Q9Y4P9 236 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 NOX1Q9Y5S8 564 aa12.46□□□□□ -0.41
PAF1-202ENST00000416728 MALRD1Q5VYJ5 2156 aa12.46□□□□□ -0.42
PAF1-202ENST00000416728 A0A0B4J2E0 115 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 A0A1B0GX12 115 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 ZNF726A6NNF4 738 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 M0R233 179 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 SERPINB7O75635 380 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 TGDSO95455 350 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 BGLAPP02818 100 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 IGFBP1P08833 259 aaPredicted RBP12.45□□□□□ -0.42
PAF1-202ENST00000416728 B4GALT1P15291 398 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 AQP1P29972 269 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 IL2RGP31785 369 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 PIGFQ07326 219 aa12.45□□□□□ -0.42
PAF1-202ENST00000416728 TRMT5Q32P41 509 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms