RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SELENOIQ9C0D9 397 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 GABARAPL1Q9H0R8 117 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 SERTAD4Q9NUC0 356 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 HS3ST2Q9Y278 367 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 ADAM18Q9Y3Q7 739 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 KIAA1217Q5T5P2 1943 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 SULT1C2O00338 296 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 F11P03951 625 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 YIF1BQ5BJH7 314 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 FAM74A1Q5RGS3 127 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 EXOSC6Q5RKV6 272 aaKnown RBP11.92□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM88Q6PEY1 159 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 ZFP82Q8N141 532 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 OR5D14Q8NGL3 314 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 OR14L1PQ8NHC6 308 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 RNF170Q96K19 258 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 LIN7BQ9HAP6 207 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF281Q9Y2X9 895 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 UNC13CQ8NB66 2214 aa11.92□□□□□ -0.5
SCN1B-202ENST00000415950 DUX1O43812 170 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 UBL3O95164 117 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 GLI4P10075 376 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF250P15622 560 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 METAP1P53582 386 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 TRMT12Q53H54 448 aaKnown RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 DMRTC1Q5HYR2 192 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 SIGIRRQ6IA17 410 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 FBXW12Q6X9E4 464 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 LSRQ86X29 649 aaPredicted RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 OR5L2Q8NGL0 311 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 RSC1A1Q92681 617 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 DERL3Q96Q80 235 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 TEAD3Q99594 435 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 NARFLQ9H6Q4 476 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 KLK11Q9UBX7 282 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 TRIM64BA6NI03 449 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 K7EPK0 472 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 OTX2P32243 289 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 BCL2A1Q16548 175 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 HNRNPA1L2Q32P51 320 aaKnown RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 TMEM244Q5VVB8 128 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 SLC22A25Q6T423 547 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 FAM71E2Q8N5Q1 922 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 BCL7CQ8WUZ0 217 aaPredicted RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 ST8SIA4Q92187 359 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 B3GNT2Q9NY97 397 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 KCNIP1Q9NZI2 227 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 FTSJ1Q9UET6 329 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 FITM1A5D6W6 292 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 SURF4O15260 269 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 OR2T1O43869 369 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 RAF1P04049 648 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF28P17035 718 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 RBMS1P29558 406 aaKnown RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 AFF3P51826 1226 aaKnown RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 MRPL49Q13405 166 aaKnown RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 DPPA4Q7L190 304 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 CCDC71LQ8N9Z2 235 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 HAS2Q92819 552 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 DCLRE1CQ96SD1 692 aaKnown RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 C20orf85Q9H1P6 137 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 ACSS1Q9NUB1 689 aaPredicted RBP11.91□□□□□ -0.5
SCN1B-202ENST00000415950 HAO2Q9NYQ3 351 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 KCNE3Q9Y6H6 103 aa11.91□□□□□ -0.5
SCN1B-202ENST00000415950 MLC1Q15049 377 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 RBMS2Q15434 407 aaKnown RBP11.9□□□□□ -0.5
SCN1B-202ENST00000415950 C9orf135Q5VTT2 229 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 ZNF836Q6ZNA1 936 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 MCATQ8IVS2 390 aaKnown RBP11.9□□□□□ -0.5
SCN1B-202ENST00000415950 HSD17B11Q8NBQ5 300 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 UCN3Q969E3 161 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 SPIN2AQ99865 258 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 SPIN2BQ9BPZ2 258 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 NAA11Q9BSU3 229 aaPredicted RBP11.9□□□□□ -0.5
SCN1B-202ENST00000415950 APOOQ9BUR5 198 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 PCDHGA1Q9Y5H4 931 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 SULT2B1O00204 365 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 ACTL6BO94805 426 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 SEMA4FO95754 770 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 HTR1FP30939 366 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 CRYBB2P43320 205 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 RAD52P43351 418 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 TAS2R31P59538 309 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 TPRA1Q86W33 373 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 RLN3Q8WXF3 142 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 RASD2Q96D21 266 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 ALG12Q9BV10 488 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 BTBD2Q9BX70 525 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 SDHAF2Q9NX18 166 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 HIDE1A8MVS5 230 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 GMDSO60547 372 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 SELENOFO60613 162 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 OR7C1O76099 320 aaPredicted RBP11.9□□□□□ -0.5
SCN1B-202ENST00000415950 RAB40ALP0C0E4 278 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 BMPR1AP36894 532 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 OR1D4P47884 311 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 TAS2R20P59543 309 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 MEF2DQ14814 521 aa11.9□□□□□ -0.5
SCN1B-202ENST00000415950 ARL6IP1Q15041 203 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms