RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SLC1A3P43003 542 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 CDH12P55289 794 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 P2RX3P56373 397 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 TOMM34Q15785 309 aaPredicted RBP13.09□□□□□ -0.31
SGCE-202ENST00000415788 ZNF79Q15937 498 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 BAK1Q16611 211 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 EXOC3L2Q2M3D2 409 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 TMEM44Q2T9K0 475 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 RAET1LQ5VY80 246 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 SIGIRRQ6IA17 410 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 OR9Q1Q8NGQ5 310 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 NEIL3Q8TAT5 605 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 GPR137Q96N19 417 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 MCHR1Q99705 422 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 NIPSNAP1Q9BPW8 284 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 TTYH2Q9BSA4 534 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 LDAHQ9H6V9 325 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 PLSCR2Q9NRY7 297 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 RPS6KB2Q9UBS0 482 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 NPIPA1Q9UND3 350 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 NTNG1Q9Y2I2 539 aa13.09□□□□□ -0.31
SGCE-202ENST00000415788 TRGV5A0A0B4J1U4 118 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 A0A1W2PQ09 198 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 ZAR1LA6NP61 321 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 NTN1O95631 604 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 CRYZL1O95825 349 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 CELA3AP09093 270 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 MYL9P24844 172 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 IFNA8P32881 189 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 OR1E2P47887 323 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 MAP2K6P52564 334 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 PTGES3Q15185 160 aaKnown RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 WIPI1Q5MNZ9 446 aaPredicted RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 ZNF613Q6PF04 617 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 PTCHD4Q6ZW05 846 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 YRDCQ86U90 279 aaKnown RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 OR4D11Q8NGI4 311 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 SUN5Q8TC36 379 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 ZFAND1Q8TCF1 268 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 DNAJA4Q8WW22 397 aaPredicted RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 SFXN2Q96NB2 322 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 KLHDC3Q9BQ90 382 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 WFDC6Q9BQY6 131 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 DEFB127Q9H1M4 99 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 NIPAL2Q9H841 368 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 RNF121Q9H920 327 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 EXOSC4Q9NPD3 245 aaKnown RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 ASF1BQ9NVP2 202 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 RPH3AQ9Y2J0 694 aaPredicted RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 NINQ8N4C6 2090 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 A0A1B0GVC2 190 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 IL1AP01583 271 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 TNFRSF1BP20333 461 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 CBLP22681 906 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 FKBP2P26885 142 aaKnown RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 MST1P26927 711 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 HTR2AP28223 471 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 APOBEC1P41238 236 aaKnown RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 LIMS1P48059 325 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 SNRPGP62308 76 aaKnown RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 HOXC5Q00444 222 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 FOXF1Q12946 379 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
SGCE-202ENST00000415788 SLC35F1Q5T1Q4 408 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 TRILQ7L0X0 811 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 GHDCQ8N2G8 530 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 CADM2Q8N3J6 435 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 CLDN22Q8N7P3 220 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 CPT1CQ8TCG5 803 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 BBC3Q96PG8 261 aaPredicted RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 MND1Q9BWT6 205 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 BARHL1Q9BZE3 327 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 ADAM19Q9H013 955 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 TSPAN10Q9H1Z9 355 aaPredicted RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 EXO5Q9H790 373 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 C12orf10Q9HB07 376 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 SSR3Q9UNL2 185 aa13.08□□□□□ -0.32
SGCE-202ENST00000415788 LSM2Q9Y333 95 aaKnown RBP13.08□□□□□ -0.32
SGCE-202ENST00000415788 EML6Q6ZMW3 1958 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 A8MV72 311 aaPredicted RBP13.07□□□□□ -0.32
SGCE-202ENST00000415788 TPST2O60704 377 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 ACTL6AO96019 429 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 POLR2HP52434 150 aaKnown RBP13.07□□□□□ -0.32
SGCE-202ENST00000415788 CRISP1P54107 249 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 GFRA1P56159 465 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 OR1Q1Q15612 314 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 TMEM201Q5SNT2 666 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 ULK3Q6PHR2 472 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 DEF8Q6ZN54 512 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 PLEKHM3Q6ZWE6 761 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 ZNF767PQ75MW2 155 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 RBM45Q8IUH3 476 aaKnown RBP13.07□□□□□ -0.32
SGCE-202ENST00000415788 TMEM80Q96HE8 168 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 PRRC1Q96M27 445 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 PIP5K1AQ99755 562 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 SLC6A15Q9H2J7 730 aa13.07□□□□□ -0.32
SGCE-202ENST00000415788 RANGRFQ9HD47 186 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms