RNA–Protein interactions for RNA: ENST00000413636.6

CIRBP-202, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-202ENST00000413636 C1DQ13901 141 aaKnown RBP16.69■□□□□ 0.26
CIRBP-202ENST00000413636 HIST3H2AQ7L7L0 130 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 P2RY8Q86VZ1 359 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 C10orf53Q8N6V4 93 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 ATP6V1C2Q8NEY4 427 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 HIST1H2ACQ93077 130 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 RELTQ969Z4 430 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 TMEM185BQ9H7F4 350 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 HINT3Q9NQE9 182 aaKnown RBP16.69■□□□□ 0.26
CIRBP-202ENST00000413636 SERINC1Q9NRX5 453 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 CHRNA9Q9UGM1 479 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 HIF3AQ9Y2N7 669 aa16.69■□□□□ 0.26
CIRBP-202ENST00000413636 EXOSC1Q9Y3B2 195 aaKnown RBP16.69■□□□□ 0.26
CIRBP-202ENST00000413636 TMEM72A0PK05 275 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 A8MVM7 634 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 SUSD5O60279 629 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 GABARAPO95166 117 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 SLC2A10O95528 541 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 PPP1R3DO95685 299 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 MT-ATP6P00846 226 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 OPN1LWP04000 364 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 ASAH2BP0C7U1 165 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 APEHP13798 732 aaKnown RBP16.68■□□□□ 0.26
CIRBP-202ENST00000413636 RPL4P36578 427 aaKnown RBP16.68■□□□□ 0.26
CIRBP-202ENST00000413636 STARP49675 285 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 HSF1Q00613 529 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 SELENBP1Q13228 472 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 LSAMPQ13449 338 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 MEPCEQ7L2J0 689 aaKnown RBP16.68■□□□□ 0.26
CIRBP-202ENST00000413636 NANOGP1Q8N7R0 232 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 GPR137Q96N19 417 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 BBC3Q96PG8 261 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-202ENST00000413636 ERMAPQ96PL5 475 aaPredicted RBP16.68■□□□□ 0.26
CIRBP-202ENST00000413636 NAA50Q9GZZ1 169 aaKnown RBP16.68■□□□□ 0.26
CIRBP-202ENST00000413636 NRIP3Q9NQ35 241 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 PLSCR2Q9NRY7 297 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 EXOGQ9Y2C4 368 aaKnown RBP16.68■□□□□ 0.26
CIRBP-202ENST00000413636 SVILO95425 2214 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 SPTA1P02549 2419 aa16.68■□□□□ 0.26
CIRBP-202ENST00000413636 SLC22A31A6NKX4 558 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 MYL12BO14950 172 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 OR2T1O43869 369 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 CD36P16671 472 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 MED22Q15528 200 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 ARMCX4Q5H9R4 360 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 SLC35F1Q5T1Q4 408 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 C3orf33Q6P1S2 294 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 LRRC17Q8N6Y2 441 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 OR6S1Q8NH40 331 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 SMPDL3BQ92485 455 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 TAPBPLQ9BX59 468 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 SPRR3Q9UBC9 169 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 TNFRSF10DQ9UBN6 386 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 A0A1B0GVC2 190 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 LINC01387J3KSC0 135 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 M0R082 166 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 IMPA2O14732 288 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 SLC22A1O15245 554 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 ATE1O95260 518 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 TSPAN19P0C672 248 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 POU3F2P20265 443 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-202ENST00000413636 TDGF1P3P51864 188 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 RAC1P63000 192 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.67■□□□□ 0.267e-8■■□□□ 13.6
CIRBP-202ENST00000413636 ITGADQ13349 1161 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.67■□□□□ 0.26
CIRBP-202ENST00000413636 NIPAL3Q6P499 406 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 PLBD1Q6P4A8 553 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 SLC16A12Q6ZSM3 486 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 MAMDC2Q7Z304 686 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-202ENST00000413636 ABTB1Q969K4 478 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-202ENST00000413636 KTI12Q96EK9 354 aaPredicted RBP16.67■□□□□ 0.26
CIRBP-202ENST00000413636 MGLLQ99685 303 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 JAM3Q9BX67 310 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 OR11A1Q9GZK7 315 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 IER3IP1Q9Y5U9 82 aa16.67■□□□□ 0.26
CIRBP-202ENST00000413636 A0A1B0GTH9 108 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 TMEM129A0AVI4 362 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 LRRN3E7EW58 273 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 ZNHIT1O43257 154 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 AHCYL1O43865 530 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 ACTL6AO96019 429 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 PAX7P23759 505 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 PCSK6P29122 969 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 SHC1P29353 583 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 SFTPDP35247 375 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 ATP6V1E1P36543 226 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 SPHARQ15513 63 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 CTF1Q16619 201 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 KRTCAP3Q53RY4 240 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 ZNF362Q5T0B9 420 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-202ENST00000413636 FAM69AQ5T7M9 428 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 VASNQ6EMK4 673 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 GHDCQ8N2G8 530 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 SLC37A3Q8NCC5 494 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 TAAR8Q969N4 342 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 OTULINQ96BN8 352 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 SLX1AQ9BQ83 275 aa16.66■□□□□ 0.26
CIRBP-202ENST00000413636 LSM2Q9Y333 95 aaKnown RBP16.66■□□□□ 0.26
CIRBP-202ENST00000413636 SPIN1Q9Y657 262 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms