RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 GPRIN3Q6ZVF9 776 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 TIPARPQ7Z3E1 657 aaKnown RBP3.68□□□□□ -1.82
BRCA1-204ENST00000412061 C17orf78Q8N4C9 275 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF565Q8N9K5 539 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 OR5B3Q8NH48 314 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 NUBPLQ8TB37 319 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 ADAMTS16Q8TE57 1224 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 PYROXD1Q8WU10 500 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 TMEM190Q8WZ59 177 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 GTF3AQ92664 365 aaKnown RBP3.68□□□□□ -1.82
BRCA1-204ENST00000412061 TNFRSF14Q92956 283 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF501Q96CX3 271 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-204ENST00000412061 TMEM80Q96HE8 168 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 CPB2Q96IY4 423 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 RNF170Q96K19 258 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 HSFY1Q96LI6 401 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 ALS2CR12Q96Q35 445 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 FAIM2Q9BWQ8 316 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 DGCR6LQ9BY27 220 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 ZYG11BQ9C0D3 744 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 KIR3DX1Q9H7L2 352 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 EXOSC3Q9NQT5 275 aaKnown RBP3.68□□□□□ -1.82
BRCA1-204ENST00000412061 SPHK2Q9NRA0 654 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 AGPAT4Q9NRZ5 378 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 STMN3Q9NZ72 180 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 MLXQ9UH92 298 aa3.68□□□□□ -1.82
BRCA1-204ENST00000412061 YARS2Q9Y2Z4 477 aaKnown RBP3.68□□□□□ -1.82
BRCA1-204ENST00000412061 RPL36Q9Y3U8 105 aaKnown RBP3.68□□□□□ -1.82
BRCA1-204ENST00000412061 A0A087WW49 117 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 IGHV3-38A0A0C4DH36 116 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 C1orf232A0A0U1RR37 186 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 FAM231BA6NCW3 169 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 GOLGA8RI6L899 631 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 SOX15O60248 233 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CST4P01036 141 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 RPN2P04844 631 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 PVRP15151 417 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 GNB3P16520 340 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 HOXB6P17509 224 aaKnown RBP3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CTRB1P17538 263 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 HTR2CP28335 458 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CALCRP30988 508 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 PTGDSP41222 190 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CSKP41240 450 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 TNFSF9P41273 254 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 YAP1P46937 504 aaKnown RBP3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CSRP3P50461 194 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 ATP6V0D1P61421 351 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CSNK1G2P78368 415 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 ORC2Q13416 577 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-204ENST00000412061 KCNJ11Q14654 390 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 OR2G6Q5TZ20 316 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 PTRHD1Q6GMV3 140 aaKnown RBP3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CTRB2Q6GPI1 263 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 SLC35D2Q76EJ3 337 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CMC1Q7Z7K0 106 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CARM1Q86X55 608 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 LRRC49Q8IUZ0 686 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 METTL4Q8N3J2 472 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 EID2Q8N6I1 236 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 ACOT4Q8N9L9 421 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CYB561A3Q8NBI2 242 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 FAM76AQ8TAV0 307 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-204ENST00000412061 CRYGNQ8WXF5 182 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 GTF2H4Q92759 462 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 FBXO17Q96EF6 278 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 SEC22AQ96IW7 307 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 ZNF514Q96K75 400 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-204ENST00000412061 OR8B4Q96RC9 309 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 RIMS3Q9UJD0 308 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 RARRES3Q9UL19 164 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 SAMD4AQ9UPU9 718 aaKnown RBP3.67□□□□□ -1.82
BRCA1-204ENST00000412061 SAR1BQ9Y6B6 198 aa3.67□□□□□ -1.82
BRCA1-204ENST00000412061 ADGRA3Q8IWK6 1321 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CDHR2Q9BYE9 1310 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 TRGV8A0A0C4DH27 118 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 LOC100131303A0A0U1RQF7 123 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 A0A1W2PQ72 361 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 E7ENQ6 273 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 E7EWF7 191 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 E9PLD3 99 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CCL21O00585 134 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 DYNC1I1O14576 645 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 TOR1AO14656 332 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 VAPBO95292 243 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CLDN1O95832 211 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 C2P06681 752 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 CD55P08174 381 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 PSMC3P17980 439 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 PRKACGP22612 351 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 SLC2A5P22732 501 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 HTR1FP30939 366 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 EPHX2P34913 555 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 HNRNPA3P51991 378 aaKnown RBP3.66□□□□□ -1.82
BRCA1-204ENST00000412061 OR2B6P58173 313 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 GNB1P62873 340 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 MRPS15P82914 257 aaKnown RBP3.66□□□□□ -1.82
BRCA1-204ENST00000412061 SERTAD2Q14140 314 aa3.66□□□□□ -1.82
BRCA1-204ENST00000412061 SF3A2Q15428 464 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms