RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TAS2R39P59534 338 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TAS2R60P59551 318 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 DEFA1P59665 94 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 DEFA3P59666 94 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ERVFRD-1P60508 538 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 FOXM1Q08050 763 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SPOCK1Q08629 439 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PRKAA1Q13131 559 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 FASTKQ14296 549 aaKnown RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 CAPRIN1Q14444 709 aaKnown RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TGIF1Q15583 401 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ZIC1Q15915 447 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM44Q2T9K0 475 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 HKDC1Q2TB90 917 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TTLL9Q3SXZ7 439 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 KLHL12Q53G59 568 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 HSD17B12Q53GQ0 312 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PIGGQ5H8A4 983 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ARL13AQ5H913 290 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SAPCD1Q5SSQ6 148 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 DNLZQ5SXM8 178 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PRAMEF17Q5VTA0 474 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 C18orf63Q68DL7 685 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 LAMTOR1Q6IAA8 161 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PYHIN1Q6K0P9 492 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 FAM45BPQ6NSW5 357 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ARMC6Q6NXE6 501 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TTC33Q6PID6 262 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SPESP1Q6UW49 350 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TMEM207Q6UWW9 146 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 KCTD8Q6ZWB6 473 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TRILQ7L0X0 811 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ERASQ7Z444 233 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 CMC1Q7Z7K0 106 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ZFAND4Q86XD8 727 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 C1orf87Q8N0U7 546 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 C4orf33Q8N1A6 199 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 CYP4Z2PQ8N1L4 340 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SPATA6LQ8N4H0 392 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 BCORP1Q8N888 145 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 BMPERQ8N8U9 685 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TTC29Q8NA56 475 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 C17orf47Q8NEP4 570 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 OR5K2Q8NHB8 316 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 FLVCR1-AS1Q8TAF5 88 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 FAM45AQ8TCE6 357 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 EEF1AKMT1Q8WVE0 214 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 DEDD2Q8WXF8 326 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 HARBI1Q96MB7 349 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 RNF145Q96MT1 663 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SEPHS2Q99611 448 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 CMKLR1Q99788 373 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 CITED1Q99966 193 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 APOL4Q9BPW4 351 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ATG101Q9BSB4 218 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ALG12Q9BV10 488 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 CCDC32Q9BV29 185 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PINK1Q9BXM7 581 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 DNTTIP1Q9H147 329 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 OR10A2Q9H208 303 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PIGMQ9H3S5 423 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 RHOJQ9H4E5 214 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF768Q9H5H4 540 aaKnown RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 RANBP3Q9H6Z4 567 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 SEBOXQ9HB31 216 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 Q9N2J8 555 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 BIN3Q9NQY0 253 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 C19orf12Q9NSK7 152 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 DDX28Q9NUL7 540 aaKnown RBP4.14□□□□□ -1.75
SF3B1-202ENST00000409915 EXD2Q9NVH0 621 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 TAS2R13Q9NYV9 303 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 KLHL9Q9P2J3 617 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ABCD2Q9UBJ2 740 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 PADI2Q9Y2J8 665 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 DHRS7Q9Y394 339 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ADAMTS20P59510 1910 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ITPR1Q14643 2758 aa4.14□□□□□ -1.75
SF3B1-202ENST00000409915 ACACAQ13085 2346 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 NBEAQ8NFP9 2946 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 PKD1L2Q7Z442 2459 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 LOC400499M0QZD8 3231 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 AHCTF1Q8WYP5 2266 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 A0A0J9YY10 115 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 A0A0U1RQV5 110 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 A0A0U1RRA0 63 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 TCRBV3S1A0A5B6 114 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 C9orf170A2RU37 121 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RAB19A4D1S5 217 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 FAM90A10PA6NDY2 464 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 MCIDASD6RGH6 385 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 I3L521 148 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 CDC7O00311 574 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SLC28A1O00337 649 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 SLC31A2O15432 143 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 NUPL2O15504 423 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 RRP8O43159 456 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 NDUFS4O43181 175 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 AKR7A2O43488 359 aa4.13□□□□□ -1.75
SF3B1-202ENST00000409915 MRPS14O60783 128 aaKnown RBP4.13□□□□□ -1.75
SF3B1-202ENST00000409915 CBR3O75828 277 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms