RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ADGRG5Q8IZF4 528 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 OR52J3Q8NH60 311 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 MOSPD2Q8NHP6 518 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 POP5Q969H6 163 aaKnown RBP19.69■□□□□ 0.74
PTCD3-203ENST00000409783 MED18Q9BUE0 208 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 MCCC2Q9HCC0 563 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 TAS2R16Q9NYV7 291 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 UPB1Q9UBR1 384 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 HIF3AQ9Y2N7 669 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 ABCA4P78363 2273 aa19.69■□□□□ 0.74
PTCD3-203ENST00000409783 SH3PXD2BA1X283 911 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 SLC35F4A4IF30 521 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 OR6C65A6NJZ3 312 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 CDC42EP2O14613 210 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 RNF13O43567 381 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 CTAG2O75638 210 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 SERPINI2O75830 405 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 GADD45GO95257 159 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 IFNGR1P15260 489 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 CRYGSP22914 178 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 IL32P24001 234 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 RRM2P31350 389 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 DNAJA1P31689 397 aaKnown RBP19.68■□□□□ 0.74
PTCD3-203ENST00000409783 OMPP47874 163 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 LIMS1P48059 325 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 SMIM11AP58511 58 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 SPIBQ01892 262 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 LAPTM4AQ15012 233 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 SEZ6L2Q6UXD5 910 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 SLC35D2Q76EJ3 337 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 OR4K5Q8NGD3 323 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 LRGUKQ96M69 825 aa19.68■□□□□ 0.74
PTCD3-203ENST00000409783 HRNRQ86YZ3 2850 aaPredicted RBP19.68■□□□□ 0.74
PTCD3-203ENST00000409783 EFCAB9A8MZ26 197 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 AKAP8O43823 692 aaKnown RBP19.67■□□□□ 0.74
PTCD3-203ENST00000409783 SLC43A1O75387 559 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 MPGP29372 298 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 GPR4P46093 362 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 HMGA2P52926 109 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 KRTAP10-9P60411 292 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 CHRNB3Q05901 458 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 FLOT2Q14254 428 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 TAB1Q15750 504 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 GABRA6Q16445 453 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 FAM98BQ52LJ0 330 aaKnown RBP19.67■□□□□ 0.74
PTCD3-203ENST00000409783 PHYHD1Q5SRE7 291 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 ASRGL1Q7L266 308 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 C20orf196Q8IYI0 205 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 LRRC75AQ8NAA5 344 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 CANT1Q8WVQ1 401 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 ZC3HAV1LQ96H79 300 aaKnown RBP19.67■□□□□ 0.74
PTCD3-203ENST00000409783 MUS81Q96NY9 551 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 ALKBH3Q96Q83 286 aaPredicted RBP19.67■□□□□ 0.74
PTCD3-203ENST00000409783 TRIM15Q9C019 465 aa19.67■□□□□ 0.74
PTCD3-203ENST00000409783 TCRBV3S1A0A5B6 114 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 DEFB108AA8MXU0 73 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 RPL36A-HNRNPH2H7BZ11 118 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 KLF4O43474 513 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 STAMBPO95630 424 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 F13BP05160 661 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 LOXP28300 417 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-203ENST00000409783 SLC9A3P48764 834 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 BIDP55957 195 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 C9orf135Q5VTT2 229 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 RRM2BQ7LG56 351 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 OR13C2Q8NGS9 318 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 OR6X1Q8NH79 312 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 BOD1Q96IK1 185 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 FAM46AQ96IP4 442 aaKnown RBP19.66■□□□□ 0.74
PTCD3-203ENST00000409783 LRR1Q96L50 414 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 TNFRSF13CQ96RJ3 184 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 GPA33Q99795 319 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 USB1Q9BQ65 265 aaKnown RBP19.66■□□□□ 0.74
PTCD3-203ENST00000409783 MMADHCQ9H3L0 296 aaPredicted RBP19.66■□□□□ 0.74
PTCD3-203ENST00000409783 RASSF1Q9NS23 344 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 ZNF226Q9NYT6 803 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 TMEM5Q9Y2B1 443 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 LYVE1Q9Y5Y7 322 aa19.66■□□□□ 0.74
PTCD3-203ENST00000409783 TRAV27A0A087WT01 109 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 RAD51DO75771 328 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 GOSR1O95249 250 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 HRGP04196 525 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 RAP2AP10114 183 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 SAGP10523 405 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-203ENST00000409783 ZNF26P17031 533 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-203ENST00000409783 ANKDD1AQ495B1 522 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 ZER1Q7Z7L7 766 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 OAFQ86UD1 273 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 CDK20Q8IZL9 346 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 OR4C15Q8NGM1 316 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 OR51A7Q8NH64 312 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 ZNF837Q96EG3 531 aaPredicted RBP19.65■□□□□ 0.74
PTCD3-203ENST00000409783 ADAD1Q96M93 576 aaKnown RBP19.65■□□□□ 0.74
PTCD3-203ENST00000409783 ALPK1Q96QP1 1244 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 INIPQ9NRY2 104 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 VNN3Q9NY84 501 aa19.65■□□□□ 0.74
PTCD3-203ENST00000409783 DHRS12A0PJE2 317 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 NPIPB13A6NJU9 1138 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 OR5H1A6NKK0 313 aa19.64■□□□□ 0.73
PTCD3-203ENST00000409783 NPIPB4C9JG80 1138 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms