RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 F8VVB4 439 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 F8VWA3 439 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 BLOC1S5-TXNDC5H3BN57 136 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 H7BY64 318 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 TMEM189-UBE2V1I3L0A0 370 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 CLDN4O14493 209 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 MBTPS2O43462 519 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 OR10H2O60403 315 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 IFNGP01579 166 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 PMP2P02689 132 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 CD14P08571 375 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 HIST1H1BP16401 226 aaKnown RBP11.71□□□□□ -0.53
HERC3-203ENST00000407637 EPHB3P54753 998 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 PCBP4P57723 403 aaKnown RBP11.71□□□□□ -0.53
HERC3-203ENST00000407637 SIRPAP78324 504 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 DLK2Q6UY11 383 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 FBXO22Q8NEZ5 403 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 EDAQ92838 391 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 MICU1Q9BPX6 476 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 SULT4A1Q9BR01 284 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 ZDHHC5Q9C0B5 715 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 STEAP1Q9UHE8 339 aa11.71□□□□□ -0.53
HERC3-203ENST00000407637 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 NPC1O15118 1278 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 SNAI1O95863 264 aaPredicted RBP11.71□□□□□ -0.54
HERC3-203ENST00000407637 CATP04040 527 aaKnown RBP11.71□□□□□ -0.54
HERC3-203ENST00000407637 HOXB5P09067 269 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 HOXA5P20719 270 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 CRMP1Q14194 572 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 HYAL4Q2M3T9 481 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 DUSP28Q4G0W2 176 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 NSUN5P2Q63ZY6 315 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 SLC41A3Q96GZ6 507 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 PPP1R16AQ96I34 528 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 ARHGDIGQ99819 225 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 C2orf88Q9BSF0 95 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 KLF15Q9UIH9 416 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 KCNE3Q9Y6H6 103 aa11.71□□□□□ -0.54
HERC3-203ENST00000407637 NUP210LQ5VU65 1888 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 A0A087WV48 116 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 UNC119BA6NIH7 251 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 PLPP1O14494 284 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 KLKB1P03952 638 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 ARG1P05089 322 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 CTSHP09668 335 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 CALCBP10092 127 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 IRF1P10914 325 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 NPPBP16860 134 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 TEAD1P28347 426 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 PCP4P48539 62 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 GSK3AP49840 483 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 RGS8P57771 180 aaPredicted RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 SRSF4Q08170 494 aaKnown RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 LASP1Q14847 261 aaKnown RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 NR0B2Q15466 257 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 STEAP1BQ6NZ63 245 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 LCTLQ6UWM7 567 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 THSD4Q6ZMP0 1018 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 GJD3Q8N144 294 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 TM4SF18Q96CE8 201 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 EFCAB11Q9BUY7 163 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 BCL2L10Q9HD36 194 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 TAS2R8Q9NYW2 309 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 SLC7A7Q9UM01 511 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 WASF3Q9UPY6 502 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 DYRK1BQ9Y463 629 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 PIAS3Q9Y6X2 628 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 POLR2AP24928 1970 aaKnown RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 FAM157AC9JC47 383 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 MAN2B1O00754 1011 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 ZNF208O43345 1280 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 GJB5O95377 273 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 PAPLNO95428 1278 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 HLA-AP01891 365 aaKnown RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 RPN2P04844 631 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 NR2C1P13056 603 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 SLC2A5P22732 501 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 CD1CP29017 333 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 NAA10P41227 235 aaPredicted RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 KHKP50053 298 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 ACTC1P68032 377 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 ACTA1P68133 377 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 LTBQ06643 244 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 TMEM115Q12893 351 aaPredicted RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 KIAA0141Q14154 515 aaPredicted RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 LPCAT3Q6P1A2 487 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 UNQ9370/PRO34162Q6UXP9 181 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 MAMDC2Q7Z304 686 aaPredicted RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 OR10D4PQ8NGN7 298 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 C15orf40Q8WUR7 153 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 ZNF480Q8WV37 535 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 SECTM1Q8WVN6 248 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 TFGQ92734 400 aaPredicted RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 ZMYND19Q96E35 227 aaPredicted RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 MCHR1Q99705 422 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 SEPT5Q99719 369 aaPredicted RBP11.7□□□□□ -0.54
HERC3-203ENST00000407637 ACTRT3Q9BYD9 372 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 SMOC1Q9H4F8 434 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 CMC2Q9NRP2 79 aa11.7□□□□□ -0.54
HERC3-203ENST00000407637 GAR1Q9NY12 217 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms