RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 ZNF337Q9Y3M9 751 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 HYAL3O43820 417 aaPredicted RBP12.91□□□□□ -0.34
DUSP28-202ENST00000405954 GNRH1P01148 92 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 ATXN8OSP0DMR3 200 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 ACRV1P26436 265 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 HOXC13P31276 330 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 INPP5JQ15735 1006 aaPredicted RBP12.91□□□□□ -0.34
DUSP28-202ENST00000405954 ZNF239Q16600 458 aaKnown RBP12.91□□□□□ -0.34
DUSP28-202ENST00000405954 C9orf64Q5T6V5 341 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 HIST2H3PS2Q5TEC6 136 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 OR2T2Q6IF00 324 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 MRPL10Q7Z7H8 261 aaKnown RBP12.91□□□□□ -0.34
DUSP28-202ENST00000405954 ZNF511Q8NB15 262 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 OR2L2Q8NH16 312 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 CCDC74BQ96LY2 380 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 METTL9Q9H1A3 318 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 UBQLN3Q9H347 655 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 ZDHHC8Q9ULC8 765 aa12.91□□□□□ -0.34
DUSP28-202ENST00000405954 TRBV23OR9-2A0A075B6M9 112 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 LRP3O75074 770 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 PSEN2P49810 448 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 LTBQ06643 244 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 LIPNQ5VXI9 398 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 IL34Q6ZMJ4 242 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 FAM220AQ7Z4H9 259 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 TRMT61BQ9BVS5 477 aaKnown RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 LGR4Q9BXB1 951 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ZDHHC5Q9C0B5 715 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 SEMA4GQ9NTN9 838 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 DOK5Q9P104 306 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 A4GNTQ9UNA3 340 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 FBXO7Q9Y3I1 522 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 WIF1Q9Y5W5 379 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ELOA3DA6NLF2 546 aaPredicted RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 KDM4EB2RXH2 506 aaPredicted RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 HSPA12AO43301 675 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 GSTZ1O43708 216 aaPredicted RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 RAB40ALP0C0E4 278 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ST6GAL1P15907 406 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 HTR5AP47898 357 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 NHLH2Q02577 135 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 TAF10Q12962 218 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ELOA3BQ3SY89 546 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 LYPLAL1Q5VWZ2 237 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ARMC6Q6NXE6 501 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 C1orf94Q6P1W5 598 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ZNF705AQ6ZN79 300 aaPredicted RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ZNF227Q86WZ6 799 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ELOA3Q8NG57 546 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 RAB40AQ8WXH6 277 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 TMEM169Q96HH4 297 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 LCORQ96JN0 433 aaPredicted RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 SLC23A2Q9UGH3 650 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 SPAG17Q6Q759 2223 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 A0A087WV62 115 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 A0A0U1RQF3 1178 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 IFITM5A6NNB3 132 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 CXCL11O14625 94 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ADAMTS4O75173 837 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 SCAF4O95104 1147 aaKnown RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 SFTPBP07988 381 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 HOXB9P17482 250 aaPredicted RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 CR2P20023 1033 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 TLX1P31314 330 aaPredicted RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 CXADRP78310 365 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 TGM3Q08188 693 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 COL13A1Q5TAT6 717 aaPredicted RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 Q6ZRG5 221 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 GALNTL5Q7Z4T8 443 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 PPP1R3BQ86XI6 285 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 ZNF676Q8N7Q3 588 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 TSEN15Q8WW01 171 aaKnown RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 AUTS2Q8WXX7 1259 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 SMPDL3AQ92484 453 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 MARS2Q96GW9 593 aaKnown RBP12.9□□□□□ -0.34
DUSP28-202ENST00000405954 HS6ST2Q96MM7 605 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 LRFN5Q96NI6 719 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 PTPN18Q99952 460 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 KXD1Q9BQD3 176 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 GPR174Q9BXC1 333 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 SLC12A9Q9BXP2 914 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 KCND3Q9UK17 655 aa12.9□□□□□ -0.34
DUSP28-202ENST00000405954 SURF4O15260 269 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 CLUP10909 449 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 HIST1H1BP16401 226 aaKnown RBP12.89□□□□□ -0.35
DUSP28-202ENST00000405954 CSNK1EP49674 416 aaKnown RBP12.89□□□□□ -0.35
DUSP28-202ENST00000405954 SNRPNP63162 240 aaKnown RBP12.89□□□□□ -0.35
DUSP28-202ENST00000405954 COL9A2Q14055 689 aaPredicted RBP12.89□□□□□ -0.35
DUSP28-202ENST00000405954 ZNHIT3Q15649 155 aaPredicted RBP12.89□□□□□ -0.35
DUSP28-202ENST00000405954 FAM219AQ8IW50 185 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 EID2Q8N6I1 236 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 OR13C9Q8NGT0 318 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 TERB2Q8NHR7 220 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 HPSE2Q8WWQ2 592 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 OR52D1Q9H346 318 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 NDOR1Q9UHB4 597 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 NUDT19A8MXV4 375 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 NPIPB9F8W1W9 429 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 MOSPD3O75425 235 aa12.89□□□□□ -0.35
DUSP28-202ENST00000405954 FURINP09958 794 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms