RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 FCRLAQ7L513 359 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 ZPLD1Q8TCW7 415 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 TRUB1Q8WWH5 349 aaKnown RBP19.61■□□□□ 0.73
EPCAM-202ENST00000405271 TSPAN32Q96QS1 320 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 TXNIPQ9H3M7 391 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 CMC2Q9NRP2 79 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 TVP23BQ9NYZ1 205 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 GRHPRQ9UBQ7 328 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 KLHL21Q9UJP4 597 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 ADAM18Q9Y3Q7 739 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 ZNF175Q9Y473 711 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 SHANK1Q9Y566 2161 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 FLNBO75369 2602 aaKnown RBP19.61■□□□□ 0.73
EPCAM-202ENST00000405271 IGHV3-15A0A0B4J1V0 119 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 NPIPA2E9PIF3 369 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 NPIPA3F8WFD2 350 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 CYTIPO60759 359 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 IFNGP01579 166 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 ZNF43P17038 809 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 KLK2P20151 261 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 RPL27P61353 136 aaKnown RBP19.61■□□□□ 0.73
EPCAM-202ENST00000405271 IL5RAQ01344 420 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 PON3Q15166 354 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 SNAPC1Q16533 368 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 FAM205BPQ63HN1 556 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 KRT80Q6KB66 452 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 HDDC2Q7Z4H3 204 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 THAP5Q7Z6K1 395 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 GPAT4Q86UL3 456 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 CCDC103Q8IW40 242 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 ENTHD1Q8IYW4 607 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 OR8J1Q8NGP2 316 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 RNF128Q8TEB7 428 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 TUBA1CQ9BQE3 449 aa19.61■□□□□ 0.73
EPCAM-202ENST00000405271 RIIAD1A6NNX1 92 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 RAMP1O60894 148 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 SERPINI2O75830 405 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 PLGP00747 810 aaPredicted RBP19.6■□□□□ 0.73
EPCAM-202ENST00000405271 FCGR2AP12318 317 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 ZNF3P17036 446 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 PTGS2P35354 604 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 ISL1P61371 349 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 TOP3AQ13472 1001 aaPredicted RBP19.6■□□□□ 0.73
EPCAM-202ENST00000405271 SF3B4Q15427 424 aaKnown RBP eCLIP19.6■□□□□ 0.732e-8■■■■■ 37
EPCAM-202ENST00000405271 ACKR1Q16570 336 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 KDM8Q8N371 416 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 Q96M85 177 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 FN3KQ9H479 309 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 RNF6Q9Y252 685 aa19.6■□□□□ 0.73
EPCAM-202ENST00000405271 TEX13CA0A0J9YWL9 993 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 CLCA1A8K7I4 914 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 TRAF3IP2O43734 574 aaPredicted RBP19.59■□□□□ 0.73
EPCAM-202ENST00000405271 HLA-DOBP13765 273 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 SLC16A1P53985 500 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 TEKQ02763 1124 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 KRR1Q13601 381 aaKnown RBP19.59■□□□□ 0.73
EPCAM-202ENST00000405271 C1DQ13901 141 aaKnown RBP19.59■□□□□ 0.73
EPCAM-202ENST00000405271 SLC17A1Q14916 467 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 MAD2L1BPQ15013 274 aaPredicted RBP19.59■□□□□ 0.73
EPCAM-202ENST00000405271 PDK3Q15120 406 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 PTCHD4Q6ZW05 846 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 SLC35D2Q76EJ3 337 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 FGD2Q7Z6J4 655 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 ADCK1Q86TW2 530 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 ZNF519Q8TB69 540 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 TMEM163Q8TC26 289 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 FBLIM1Q8WUP2 373 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 ROBO4Q8WZ75 1007 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 ASF1BQ9NVP2 202 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 ZNF226Q9NYT6 803 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 KLHL13Q9P2N7 655 aa19.59■□□□□ 0.73
EPCAM-202ENST00000405271 ZNF346Q9UL40 294 aaKnown RBP19.59■□□□□ 0.73
EPCAM-202ENST00000405271 A6NIZ1 184 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 ZNF716A6NP11 495 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 AHRRA9YTQ3 701 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 PRKYO43930 277 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 BCL10O95999 233 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 RAP1BP61224 184 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 SNRPGP62308 76 aaKnown RBP19.58■□□□□ 0.73
EPCAM-202ENST00000405271 RAP1AP62834 184 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 EFNB1P98172 346 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 CD47Q08722 323 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 SLC35F1Q5T1Q4 408 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 ADGRE4PQ86SQ3 457 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 ATCAYQ86WG3 371 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 ARIH2OSQ8N7S6 290 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 TCEANCQ8N8B7 351 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 OR9K2Q8NGE7 335 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 ASB10Q8WXI3 467 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 RASD2Q96D21 266 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 PRRG4Q9BZD6 226 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 KLHL9Q9P2J3 617 aa19.58■□□□□ 0.73
EPCAM-202ENST00000405271 M0R129 80 aa19.57■□□□□ 0.72
EPCAM-202ENST00000405271 AKAP8O43823 692 aaKnown RBP19.57■□□□□ 0.72
EPCAM-202ENST00000405271 IFNGR1P15260 489 aa19.57■□□□□ 0.72
EPCAM-202ENST00000405271 HIST1H1CP16403 213 aaKnown RBP19.57■□□□□ 0.72
EPCAM-202ENST00000405271 GABRB1P18505 474 aa19.57■□□□□ 0.72
EPCAM-202ENST00000405271 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.57■□□□□ 0.72
EPCAM-202ENST00000405271 RASGEF1BQ0VAM2 473 aa19.57■□□□□ 0.72
EPCAM-202ENST00000405271 RNPS1Q15287 305 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms