RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 MGAT4CQ9UBM8 478 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 MRM2Q9UI43 246 aaKnown RBP9.78□□□□□ -0.84
CLIP4-204ENST00000404424 I3L521 148 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 RPP14O95059 124 aaKnown RBP9.78□□□□□ -0.84
CLIP4-204ENST00000404424 NDUFB6O95139 128 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 ABHD16AO95870 558 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 OR8G3PP0DMU2 310 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 RRASP10301 218 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 GRPRP30550 384 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 CTHP32929 405 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 GALNSP34059 522 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 MAGEB1P43366 347 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 TAS2R20P59543 309 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 RAP2BP61225 183 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 PPP1CAP62136 330 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 MRPS21P82921 87 aaKnown RBP9.78□□□□□ -0.84
CLIP4-204ENST00000404424 HHEXQ03014 270 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 EGR3Q06889 387 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 DEFB110Q30KQ9 67 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 LINC00303Q3SY05 128 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 LRRTM1Q86UE6 522 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 COMMD7Q86VX2 200 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 SDR16C5Q8N3Y7 309 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 LSM14AQ8ND56 463 aaKnown RBP9.78□□□□□ -0.84
CLIP4-204ENST00000404424 ZNF417Q8TAU3 575 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 LRRC20Q8TCA0 184 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 THRSPQ92748 146 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 CCDC74AQ96AQ1 378 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 TMEM106CQ9BVX2 250 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 EXOSC3Q9NQT5 275 aaKnown RBP9.78□□□□□ -0.84
CLIP4-204ENST00000404424 TAS2R8Q9NYW2 309 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 FRRS1LQ9P0K9 344 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 ERVK-19Q9WJR5 959 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 TMEM14AQ9Y6G1 99 aa9.78□□□□□ -0.84
CLIP4-204ENST00000404424 ANXA2P2A6NMY6 339 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 FAM171A2A8MVW0 826 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 MEN1O00255 615 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 PHYHO14832 338 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 SERPINI2O75830 405 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 TOXO94900 526 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 OR2A4O95047 310 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 NSA2O95478 260 aaKnown RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 ANXA2P07355 339 aaKnown RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 ASAH2BP0C7U1 165 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 RAD52P43351 418 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 BIKQ13323 160 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 OPCMLQ14982 345 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 COL13A1Q5TAT6 717 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 FNDC7Q5VTL7 733 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 FAM109BQ6ICB4 259 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 TAF8Q7Z7C8 310 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 ZNF615Q8N8J6 731 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 C7orf57Q8NEG2 295 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 OR13H1Q8NG92 308 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 OR2T4Q8NH00 348 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 CEP76Q8TAP6 659 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 THEM6Q8WUY1 208 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 OR2A7Q96R45 310 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 PELOQ9BRX2 385 aaKnown RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 COMMD4Q9H0A8 199 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 NARFLQ9H6Q4 476 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 MMP25Q9NPA2 562 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 UBQLN4Q9NRR5 601 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 PIPOXQ9P0Z9 390 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 KIF25Q9UIL4 384 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 LAMP5Q9UJQ1 280 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 CLDN16Q9Y5I7 305 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 LRP4O75096 1905 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 TICRRQ7Z2Z1 1910 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 PLSCR5A0PG75 271 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 TMEM212A6NML5 194 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 XRCC3O43542 346 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 ZNF254O75437 659 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 CDC123O75794 336 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 GLSO94925 669 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 CTSBP07858 339 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 HPGDP15428 266 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 ADRA2CP18825 462 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 PGDP52209 483 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 HSD17B7P56937 341 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 PSMA6P60900 246 aaKnown RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 CBFBQ13951 182 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 NNATQ16517 81 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 AANATQ16613 207 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 ZNF227Q86WZ6 799 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 SLC22A18ASQ8N1D0 253 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 C10orf53Q8N6V4 93 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 PIGKQ92643 395 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 KLHL15Q96M94 604 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 SEC22CQ9BRL7 303 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 TCEAL2Q9H3H9 227 aaPredicted RBP9.77□□□□□ -0.85
CLIP4-204ENST00000404424 C12orf10Q9HB07 376 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 GRHPRQ9UBQ7 328 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 ZNF69Q9UC07 566 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 STEAP1Q9UHE8 339 aa9.77□□□□□ -0.85
CLIP4-204ENST00000404424 TRBV5-7A0A0A0MS05 114 aa9.76□□□□□ -0.85
CLIP4-204ENST00000404424 PRAMEF26H0Y7S4 382 aa9.76□□□□□ -0.85
CLIP4-204ENST00000404424 RBBP9O75884 186 aa9.76□□□□□ -0.85
CLIP4-204ENST00000404424 CFDP00746 253 aaPredicted RBP9.76□□□□□ -0.85
CLIP4-204ENST00000404424 UBL4AP11441 157 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms