RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 FLVCR1Q9Y5Y0 555 aa10.96□□□□□ -0.65
LINC00339-201ENST00000404210 EPG5Q9HCE0 2579 aa10.96□□□□□ -0.66
LINC00339-201ENST00000404210 DOCK7Q96N67 2140 aa10.96□□□□□ -0.66
LINC00339-201ENST00000404210 A0A1B0GUH1 482 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 MCIDASD6RGH6 385 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 SS18L1O75177 396 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-201ENST00000404210 TOXO94900 526 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 SOX14O95416 240 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 TXNDC12O95881 172 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 BCL10O95999 233 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 PLGP00747 810 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-201ENST00000404210 POU1F1P28069 291 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 RPL27P61353 136 aaKnown RBP10.95□□□□□ -0.66
LINC00339-201ENST00000404210 POU3F1Q03052 451 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-201ENST00000404210 PMPCAQ10713 525 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 GINS1Q14691 196 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 PTGES3Q15185 160 aaKnown RBP10.95□□□□□ -0.66
LINC00339-201ENST00000404210 GUSBP1Q15486 140 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 SNCBQ16143 134 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 TMEM201Q5SNT2 666 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 GPR139Q6DWJ6 353 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 C3P1Q6ZMU1 363 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 LNX2Q8N448 690 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 OR2T33Q8NG76 320 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 OR8D4Q8NGM9 314 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 TXNDC15Q96J42 360 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 ADAD1Q96M93 576 aaKnown RBP10.95□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
LINC00339-201ENST00000404210 DMRTA2Q96SC8 542 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 KATNB1Q9BVA0 655 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 IFT27Q9BW83 186 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 SMPD3Q9NY59 655 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-201ENST00000404210 IER3IP1Q9Y5U9 82 aa10.95□□□□□ -0.66
LINC00339-201ENST00000404210 SPTA1P02549 2419 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF726A6NNF4 738 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ZAR1LA6NP61 321 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 HSPB2A8KAH6 182 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 CENPBD1B2RD01 187 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 E9PQ18 207 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 DLGAP1O14490 977 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 BHLHE40O14503 412 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 TRAF3IP2O43734 574 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 AKAP8O43823 692 aaKnown RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 SNAP29O95721 258 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 HMGN1P05114 100 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 IFNGR1P15260 489 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 GNLYP22749 145 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 CTSSP25774 331 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 POLR2IP36954 125 aaKnown RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 VHLP40337 213 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 DAP3P51398 398 aaKnown RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 SMSP52788 366 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 PER3P56645 1201 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 CLDN17P56750 224 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ERVK-25P63136 954 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 HSPB2Q16082 182 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ACKR1Q16570 336 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ZIK1Q3SY52 487 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ARMC4Q5T2S8 1044 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 FAM205BPQ63HN1 556 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ACSM5Q6NUN0 579 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 SLC27A4Q6P1M0 643 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 FAM214BQ7L5A3 538 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 AAED1Q7RTV5 226 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 FAM122BQ7Z309 247 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 HDDC2Q7Z4H3 204 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 IGFN1Q86VF2 1251 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 RPRMLQ8N4K4 120 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ARIH2OSQ8N7S6 290 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 OR6X1Q8NH79 312 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF775Q96BV0 537 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 INTS12Q96CB8 462 aaKnown RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ERMAPQ96PL5 475 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 TEX12Q9BXU0 123 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 POLDIP3Q9BY77 421 aaKnown RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 GRIP2Q9C0E4 1043 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 TOR3AQ9H497 397 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 RIBC2Q9H4K1 309 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 SLC25A19Q9HC21 320 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 GRHPRQ9UBQ7 328 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 SH3BGRL2Q9UJC5 107 aa10.94□□□□□ -0.66
LINC00339-201ENST00000404210 NOSIPQ9Y314 301 aaKnown RBP10.94□□□□□ -0.66
LINC00339-201ENST00000404210 ESPL1Q14674 2120 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 SLC35F4A4IF30 521 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 A6NIZ1 184 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 CCL21O00585 134 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 SLC16A6O15403 523 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 AHCYL1O43865 530 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 MRPL33O75394 65 aaKnown RBP10.93□□□□□ -0.66
LINC00339-201ENST00000404210 SERPINI2O75830 405 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 ZNF432O94892 652 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 PPP1R3DO95685 299 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 IL18BPO95998 194 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 TMIGD3P0DMS9 266 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-201ENST00000404210 ACADSP16219 412 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 NOS3P29474 1203 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 AGTR1P30556 359 aa10.93□□□□□ -0.66
LINC00339-201ENST00000404210 SDHAP31040 664 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms