RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 MRPL39Q9NYK5 338 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 C19orf25Q9UFG5 118 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF346Q9UL40 294 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SEC16AO15027 2179 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 UNC13CQ8NB66 2214 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CDC14CA4D256 554 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DVL2O14641 736 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CTDSPLO15194 276 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SLC43A1O75387 559 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR6A2O95222 327 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 F13BP05160 661 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 FOSL2P15408 326 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ALOX5APP20292 161 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 KIR2DL3P43628 341 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZP4Q12836 540 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ALKBH1Q13686 389 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CEP78Q5JTW2 689 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RSBN1Q5VWQ0 802 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 APCDD1LQ8NCL9 501 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZPLD1Q8TCW7 415 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SMAP2Q8WU79 429 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RNF138Q8WVD3 245 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 INTS14Q96SY0 518 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 C7orf50Q9BRJ6 194 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 MARVELD1Q9BSK0 173 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 THAP7Q9BT49 309 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 WACQ9BTA9 647 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PTDSS2Q9BVG9 487 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SDHAF3Q9NRP4 125 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 VSX1Q9NZR4 365 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 LAMP5Q9UJQ1 280 aa16.05■□□□□ 0.16
HLA-DQB1-204ENST00000399084 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SCRG1O75711 98 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 HOXD12P35452 270 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 MMP15P51511 669 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 EMP2P54851 167 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 BTG1P62324 171 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DMWDQ09019 674 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RASGEF1BQ0VAM2 473 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 GXYLT1Q4G148 440 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 FAM27D1Q5T7N8 215 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 FAM205BPQ63HN1 556 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CDH24Q86UP0 819 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PRSS58Q8IYP2 241 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR6V1Q8N148 313 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RFLNBQ8N5W9 214 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF511Q8NB15 262 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 NLGN4YQ8NFZ3 816 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR4M1Q8NGD0 313 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DUSP19Q8WTR2 217 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CREB3L1Q96BA8 519 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR6C1Q96RD1 312 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 SRA1Q9HD15 236 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF275Q9NSD4 429 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CAMK2AQ9UQM7 478 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ADAMTS20P59510 1910 aa16.04■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CPED1A4D0V7 1026 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PRSS37A4D1T9 235 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 A6NIZ1 184 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TMEM212A6NML5 194 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CENPXA8MT69 81 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ETV2O00321 342 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF208O43345 1280 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ORC5O43913 435 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 UPK3AO75631 287 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 FAM157BP0CG42 384 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CRABP1P29762 137 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RAP1BP61224 184 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 RAP1AP62834 184 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 IL11RAQ14626 422 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 TOMM34Q15785 309 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 Q499Y3 187 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 LANCL3Q6ZV70 420 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR5AK2Q8NH90 309 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ZNF519Q8TB69 540 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 EDAQ92838 391 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 HDHD2Q9H0R4 259 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 B3GAT2Q9NPZ5 323 aa16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 AKAP7Q9P0M2 348 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 NXT1Q9UKK6 140 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB1-204ENST00000399084 LY6G6EA0A0G2JKS1 128 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 A0A0G2JMP0 313 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 IGHV5-10-1A0A0J9YXX1 117 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 A0A0X1KG70 313 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 GSTZ1O43708 216 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 ABHD16AO95870 558 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 EIF4EP06730 217 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 AHCYP23526 432 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 FKBP2P26885 142 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 DUSP3P51452 185 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CCR9P51686 369 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CLDN20P56880 219 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 OR10A3P58181 314 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 CCL7P80098 99 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 KCNJ8Q15842 424 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 LIPNQ5VXI9 398 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PEAR1Q5VY43 1037 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 GUSBP11Q6P575 273 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 PPP1R3BQ86XI6 285 aa16.02■□□□□ 0.16
HLA-DQB1-204ENST00000399084 EID2Q8N6I1 236 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms