RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ZBED5Q49AG3 693 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZFP1Q6P2D0 407 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SHQ1Q6PI26 577 aaKnown RBP10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CASP12Q6UXS9 341 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF620Q6ZNG0 422 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HIST3H2AQ7L7L0 130 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 LINGO2Q7L985 606 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 LUZP2Q86TE4 346 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 UEVLDQ8IX04 471 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CDK20Q8IZL9 346 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TMEM123Q8N131 208 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR8D4Q8NGM9 314 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GNPDA2Q8TDQ7 276 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GIPC3Q8TF64 312 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 HIST1H2ACQ93077 130 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR2M2Q96R28 347 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FEVQ99581 238 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 EMC6Q9BV81 110 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 DGCR6LQ9BY27 220 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SEMA6AQ9H2E6 1030 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PIGMQ9H3S5 423 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PDP1Q9P0J1 537 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PROCRQ9UNN8 238 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NOX1Q9Y5S8 564 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 COL12A1Q99715 3063 aa10.98□□□□□ -0.65
HLA-DQB1-203ENST00000399082 UTP20O75691 2785 aaKnown RBP10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ADGRG4Q8IZF6 3080 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 C19orf84I3L1E1 186 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MSTNO14793 375 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 RNF13O43567 381 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SERPINI2O75830 405 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IGHV3-9P01782 118 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IGFBP1P08833 259 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FCGR1AP12314 374 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IFNGR1P15260 489 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CCKARP32238 428 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ASCL1P50553 236 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CLDN17P56750 224 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ELF3P78545 371 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IL1RL1Q01638 556 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 RUNX1T1Q06455 604 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ALG10Q5BKT4 473 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PHYHD1Q5SRE7 291 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ARMC4Q5T2S8 1044 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TSPO2Q5TGU0 170 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 DMRTA1Q5VZB9 504 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FAHD1Q6P587 224 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SLC35D2Q76EJ3 337 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 AAED1Q7RTV5 226 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FAM122BQ7Z309 247 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GABRG1Q8N1C3 465 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 LINC00471Q8N535 108 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ANKK1Q8NFD2 765 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR5K1Q8NHB7 308 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CA5BP1Q8WTZ4 195 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GTPBP3Q969Y2 492 aaKnown RBP10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NRBF2Q96F24 287 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GPX7Q96SL4 187 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PLA2G12AQ9BZM1 189 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 EGLN3Q9H6Z9 239 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 INIPQ9NRY2 104 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SLC7A10Q9NS82 523 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 REV1Q9UBZ9 1251 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IL20RAQ9UHF4 553 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MGAT4BQ9UQ53 548 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 RCE1Q9Y256 329 aa10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 USP9YO00507 2555 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SPTAN1Q13813 2472 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 DOPEY2Q9Y3R5 2298 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 SLC35F4A4IF30 521 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NPIPB13A6NJU9 1138 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NPIPB4C9JG80 1138 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 PDLIM1O00151 329 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 MRPL33O75394 65 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 E2F6O75461 281 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 UPK3AO75631 287 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR6A2O95222 327 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IGHMP01871 453 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 IFNGR2P38484 337 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 BIDP55957 195 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 C1DQ13901 141 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ACKR1Q16570 336 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ANKDD1AQ495B1 522 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NIPAL3Q6P499 406 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 KLHL17Q6TDP4 642 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CD300LDQ6UXZ3 194 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 RASSF6Q6ZTQ3 369 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ZNF519Q8TB69 540 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 FANK1Q8TC84 345 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 ASB10Q8WXI3 467 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 APH1AQ96BI3 265 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 CENPNQ96H22 339 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 TSPAN32Q96QS1 320 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 KATNB1Q9BVA0 655 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GABARAPL1Q9H0R8 117 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 OR52D1Q9H346 318 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 KRCC1Q9NPI7 259 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 NRIP3Q9NQ35 241 aa10.96□□□□□ -0.65
HLA-DQB1-203ENST00000399082 GALNT8Q9NY28 637 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms