RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 LGALS4P56470 323 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 SEMA3BQ13214 749 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 PROX2Q3B8N5 592 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 MRPL2Q5T653 305 aaKnown RBP8.66□□□□□ -1.02
ATL3-201ENST00000398868 ZNF691Q5VV52 312 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 RFPL4BQ6ZWI9 263 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 NLRC3Q7RTR2 1065 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 LRP11Q86VZ4 500 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 BPIFB2Q8N4F0 458 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 NATD1Q8N6N6 113 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 PRR7Q8TB68 274 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 TMEM239Q8WW34 195 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 DCTN6O00399 190 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 FOLR1P15328 257 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 OR1Q1Q15612 314 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 GLYR1Q49A26 553 aaPredicted RBP8.66□□□□□ -1.02
ATL3-201ENST00000398868 OR4M1Q8NGD0 313 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.66□□□□□ -1.02
ATL3-201ENST00000398868 PLA2G3Q9NZ20 509 aa8.66□□□□□ -1.02
ATL3-201ENST00000398868 UBR2Q8IWV8 1755 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 DNAJC25-GNG10A0A024R161 153 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 TRAPPC13A5PLN9 417 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 LRIT2A6NDA9 550 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 GABRPO00591 440 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 NME2P1O60361 137 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 OR7C1O76099 320 aaPredicted RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 CPN1P15169 458 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 ANXA7P20073 488 aaKnown RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 IDUAP35475 653 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 TMEM200AQ86VY9 491 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 ARPC5LQ9BPX5 153 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 SEC22CQ9BRL7 303 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 GON7Q9BXV9 100 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 SDHAF2Q9NX18 166 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 PRAMEF27A3QJZ7 478 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 CNIH1O95406 144 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 GM2AP17900 193 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 TMEM240Q5SV17 173 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 PRAMEF9Q5VWM5 478 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 HTR3DQ70Z44 454 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 KHSRPQ92945 711 aaKnown RBP eCLIP8.65□□□□□ -1.02
ATL3-201ENST00000398868 UTP4Q969X6 686 aaKnown RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 OR10A5Q9H207 317 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 OR10A2Q9H208 303 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 SLAMF8Q9P0V8 285 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 PGAP2Q9UHJ9 254 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 PRAMEF4O60810 478 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 GLSO94925 669 aaPredicted RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 YIF1AO95070 293 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 THBS1P07996 1170 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 GLI4P10075 376 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 NFYAP23511 347 aaPredicted RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 DAP3P51398 398 aaKnown RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 RPS25P62851 125 aaKnown RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 SERTAD2Q14140 314 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 FAM199XQ6PEV8 388 aaPredicted RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 CMTM1Q8IZ96 169 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 OR8U1Q8NH10 309 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 OR52N5Q8NH56 324 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 CA5BP1Q8WTZ4 195 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 TIMM29Q9BSF4 260 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 MED18Q9BUE0 208 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 ERVMER34-1Q9H9K5 563 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 PADI1Q9ULC6 663 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 SEC14L6B5MCN3 397 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 M0QYG6 137 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 CSF1P09603 554 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 BMP2P12643 396 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 BAXQ07812 192 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 ARHGAP19Q14CB8 494 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 UBE2NLQ5JXB2 153 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 DHRS13Q6UX07 377 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 UNC5DQ6UXZ4 953 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 MRPL10Q7Z7H8 261 aaKnown RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 FGF14Q92915 247 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 INTS12Q96CB8 462 aaKnown RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 POM121Q96HA1 1249 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 TXNDC15Q96J42 360 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 FYTTD1Q96QD9 318 aaKnown RBP8.65□□□□□ -1.02
ATL3-201ENST00000398868 RANBP9Q96S59 729 aa8.65□□□□□ -1.02
ATL3-201ENST00000398868 TRIP11Q15643 1979 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 NUP205Q92621 2012 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 TGOLN2O43493 480 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 GABRB3P28472 473 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 IL2RGP31785 369 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 HCCSP53701 268 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 FAM69AQ5T7M9 428 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 AAED1Q7RTV5 226 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 PHOSPHO2Q8TCD6 241 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 ADAMTS16Q8TE57 1224 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 WBP2Q969T9 261 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 MIB2Q96AX9 1013 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 SLC12A9Q9BXP2 914 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 RNF167Q9H6Y7 350 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 MARCH5Q9NX47 278 aa8.65□□□□□ -1.03
ATL3-201ENST00000398868 PPP1R2P9O14990 202 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 AKR7A3O95154 331 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 RAB3AP20336 220 aa8.64□□□□□ -1.03
ATL3-201ENST00000398868 PDE7AQ13946 482 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms