RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SCRG1O75711 98 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 THY1P04216 161 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MPZP25189 248 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ERP29P30040 261 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 RAC1P63000 192 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 FHL1Q13642 323 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ZMAT1Q5H9K5 638 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 FOXL2NBQ6ZUU3 175 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 DGLUCYQ7Z3D6 616 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 TMEM52Q8NDY8 209 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 KCNE4Q8WWG9 221 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 TMEM41AQ96HV5 264 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 FAM46AQ96IP4 442 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 TGM7Q96PF1 710 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 DCLRE1CQ96SD1 692 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 UTP23Q9BRU9 249 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ANGPTL4Q9BY76 406 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MCCC2Q9HCC0 563 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CCDC187A0A096LP49 1063 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 A0A0G2JN53 185 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SLC43A1O75387 559 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CBR3O75828 277 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 IMPDH2P12268 514 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 BMP4P12644 408 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PRG2P13727 222 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 HOXB3P14651 431 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SRD5A2P31213 254 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SF3B4Q15427 424 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CDCP2Q5VXM1 449 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 C1orf210Q8IVY1 113 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 EXD3Q8N9H8 876 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SLC25A21Q9BQT8 299 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF700Q9H0M5 742 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SMURF1Q9HCE7 757 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 GLTPQ9NZD2 209 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CKLFQ9UBR5 152 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SERPINA5P05154 406 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CT62P0C5K7 136 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ELFN2Q5R3F8 820 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 C1orf100Q5SVJ3 147 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PDSS1Q5T2R2 415 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 OTOSQ8NHW6 89 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 RNF133Q8WVZ7 376 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PATE1Q8WXA2 126 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PP6455Q8WZ26 134 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MRPL13Q9BYD1 178 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ADGRL4Q9HBW9 690 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 AMBNQ9NP70 447 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 TIGARQ9NQ88 270 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 RXFP3Q9NSD7 469 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 KCNE3Q9Y6H6 103 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PMS2P2O95744 297 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 IL7P13232 177 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PRKCAP17252 672 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MLLT1Q03111 559 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF554Q86TJ5 538 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 IGFN1Q86VF2 1251 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CENPSQ8N2Z9 138 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 OR52H1Q8NGJ2 320 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 COMMD4Q9H0A8 199 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 FBXL3Q9UKT7 428 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CSO75390 466 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 OTX1P32242 354 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MMP15P51511 669 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MRPS15P82914 257 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 H3F3AP84243 136 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 TSTQ16762 297 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PLA2G2CQ5R387 149 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SLC18B1Q6NT16 456 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 CHMP1BQ7LBR1 199 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 FAM98AQ8NCA5 519 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 OR5M11Q96RB7 305 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SPRY4Q9C004 299 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 TCEAL2Q9H3H9 227 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 B4GALT7Q9UBV7 327 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 HCRTR2O43614 444 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 HYAL3O43820 417 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PRKAR1AP10644 381 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 MECP2P51608 486 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 RAC3P60763 192 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 HLA-BQ31612 363 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 RBM45Q8IUH3 476 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 RNF128Q8TEB7 428 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SNX33Q8WV41 574 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 HAVCR1Q96D42 359 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 ADOQ96SZ5 270 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 FOXQ1Q9C009 403 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 QRSL1Q9H0R6 528 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 OPA3Q9H6K4 179 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 SH2D2AQ9NP31 389 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PARPBPQ9NWS1 579 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 NCDNQ9UBB6 729 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 FOXJ3Q9UPW0 622 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 RBMX2Q9Y388 322 aaKnown RBP5.32□□□□□ -1.56
PTPRD-206ENST00000397617 PMF1-BGLAPU3KQ54 211 aa5.32□□□□□ -1.56
PTPRD-206ENST00000397617 IGKV1D-42A0A075B6H8 117 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 CCDC85CA6NKD9 419 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 ICMTO60725 284 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 DHFRP00374 187 aa5.31□□□□□ -1.56
PTPRD-206ENST00000397617 HPP00738 406 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms