RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ZNF717Q9BY31 904 aaPredicted RBP5.96□□□□□ -1.46
SMCO1-201ENST00000397537 S100A14Q9HCY8 104 aa5.96□□□□□ -1.46
SMCO1-201ENST00000397537 GDF3Q9NR23 364 aa5.96□□□□□ -1.46
SMCO1-201ENST00000397537 ABCB10Q9NRK6 738 aa5.96□□□□□ -1.46
SMCO1-201ENST00000397537 EXD2Q9NVH0 621 aa5.96□□□□□ -1.46
SMCO1-201ENST00000397537 GHRLQ9UBU3 117 aa5.96□□□□□ -1.46
SMCO1-201ENST00000397537 CACNA1BQ00975 2339 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 TRBV9A0A0B4J1U6 114 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 NPIPA5A0A0B4J1W7 369 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 A0A1W2PRD5 423 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 ZNF233A6NK53 670 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 EVPLLA8MZ36 301 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 NPIPA5E9PKD4 350 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 LMO7DNF2Z398 122 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 F8VP50 259 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 F8W036 122 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 WNT9BO14905 357 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 RNASEH1O60930 286 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 LRATO95237 230 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 DEXIO95424 95 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 PLAUP00749 431 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 HBQ1P09105 142 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CCL5P13501 91 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CD79BP40259 229 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CSKP41240 450 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 HCAR3P49019 387 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 HOXA1P49639 335 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 P2RY4P51582 365 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CDH12P55289 794 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 RAG2P55895 527 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CTSWP56202 376 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 UBE2KP61086 200 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 TAF10Q12962 218 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 FLOT2Q14254 428 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 DMRTC1Q5HYR2 192 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 PDSS1Q5T2R2 415 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 ADAM5Q6NVV9 412 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 RWDD4Q6NW29 188 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 DHRS4L2Q6PKH6 230 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 SPAG16Q8N0X2 631 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 GBGT1Q8N5D6 347 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 TFAP2BQ92481 460 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CPNE4Q96A23 557 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 XPO6Q96QU8 1125 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 ECSITQ9BQ95 431 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 NICN1Q9BSH3 213 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 BEX2Q9BXY8 128 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 POLDIP3Q9BY77 421 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 MSL2Q9HCI7 577 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 NDE1Q9NXR1 346 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 TAS2R9Q9NYW1 312 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 AUP1Q9Y679 476 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 TEX13DA0A0J9YY54 714 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 C5orf60A6NFR6 353 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 USP27XA6NNY8 438 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 SYNGR3O43761 229 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 KRT33AO76009 404 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 RCBTB2O95199 551 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 LDOC1O95751 146 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 HLA-HP01893 362 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CRYABP02511 175 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 HLA-GP17693 338 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 TCP1P17987 556 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 XRCC1P18887 633 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 RPS12P25398 132 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CALCRP30988 508 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 SLCO1A2P46721 670 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 NKX2-5P52952 324 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 MGAT3Q09327 533 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 FZD5Q13467 585 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 IMPG1Q17R60 797 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 SLC25A52Q3SY17 297 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 SLC22A6Q4U2R8 563 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 SLC25A47Q6Q0C1 308 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 Q71RC1 249 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 RCOR2Q8IZ40 523 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 UBL4BQ8N7F7 174 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 OR4Q3Q8NH05 313 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 OR2L2Q8NH16 312 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 THAP6Q8TBB0 222 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 PLPPR1Q8TBJ4 325 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 ACTL9Q8TC94 416 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 APH1AQ96BI3 265 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 MBOAT7Q96N66 472 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 CNN2Q99439 309 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 SLC6A7Q99884 636 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 UCK2Q9BZX2 261 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 NXF5Q9H1B4 397 aaKnown RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 SLC38A7Q9NVC3 462 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 USE1Q9NZ43 259 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 ZNF282Q9UDV7 671 aaPredicted RBP5.95□□□□□ -1.46
SMCO1-201ENST00000397537 MAN1B1Q9UKM7 699 aa5.95□□□□□ -1.46
SMCO1-201ENST00000397537 ZDBF2Q9HCK1 2354 aa5.94□□□□□ -1.46
SMCO1-201ENST00000397537 CHD8Q9HCK8 2581 aa5.94□□□□□ -1.46
SMCO1-201ENST00000397537 NRCAMQ92823 1304 aa5.94□□□□□ -1.46
SMCO1-201ENST00000397537 STK36Q9NRP7 1315 aa5.94□□□□□ -1.46
SMCO1-201ENST00000397537 LAMB1P07942 1786 aa5.94□□□□□ -1.46
SMCO1-201ENST00000397537 C9orf118A6NHY6 69 aa5.94□□□□□ -1.46
SMCO1-201ENST00000397537 PRR32B1ATL7 298 aa5.94□□□□□ -1.46
SMCO1-201ENST00000397537 PROB1E7EW31 1015 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms